Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0715 ATGAAGCAACCAACACCACCAAAGAAGCCATGGATCCCCTTCACAGCAAACTGCTGCACCACTGAGGACAAAACCATCTTCAGAAATTTCAGCAGGTGCAGACCATCACGTTCTGAATACTCCAAGGACATTGCTCCTTTACCTTCCTTCAGGAGGCTCTCTTTCTCCGATCTCAGCCGCTCCTCGTCCGCGCGAATCAACGAGGACCTCGCGCAGTCTTTCGGGTCGGATTTGTGGGATTTCCAGCTGAGCGAGCTGCGCGCCATCACGCAGAATTTCTCGAGCAATTTCTTGCTGGGGGAAGGTGGTTTTGGAACAGTACATAAGGGTTATATTGATGACAATTTGAGGGCTGGTTTGAAGGCTCAGCCTGTTGCTGTTAAACTTCTGGACATTGAAGGATTACAAGGACACCGTGAATGGCTTGCAGAAGTGATTTTTCTGGGGCAACTAAGACACCCCAATTTGGTTAAACTGATTGGTTATTGTTGTGAGGATGAAGAACGGTTACTTGTCTATGAATTCATGTCAAGAGGAAGCTTGGAGAATCACTTATTCAGAAGGCTAACATCACTGCCATGGGCAACAAGATTAAAAATCGCAGCAGGTGCTGCTAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTTATTTACAGGGATTTCAAGACTTCCAATGTCTTGCTTGATTCAGACTTCACAGCAAAATTGTCTGATTTTGGACTTGCAACAATGGGGCCAGAGGGATCAAAATCACACGTTACAACCAGAGTCATGGGCACTTATGGATATGCAGCCCCAGAATACATCTCAACAGGGCACTTGACCACAAAAAGTGATGTCTATAGTTTTGGGGTAGTCCTGCTAGAATTGCTTACAGGAAGAAGAGCAACAGACAAGACAAGACCAAAGACTGAGCAAAACATTGTGGATTGGTCAAAACCATACTTGAGCAGCAGCAGGAGGTTGAGGTACATCATGGATCCAAGGCTTTCAGGCCAATATTCAGTGAAGGGTTCAAAGGAGATGGCTCATTTGGCATTGCAGTGCATAAGTTTGAATCCTAAAGACAGACCAAGAATGGCAATGATTGTTGAGACTCTTGAAAGCCTGCAACAGTTCAAGGACATGGCAGTTACCAGTGGACACTGGCCAACATCATCACCAAAATCCACAACTAGAAATGGAGCCTCCAACAAGGTGCGAGCCAGAGGTGTAAACCAAAAGAAGCCCTCAACTCCAGTTCCTACCAAAAAAAGCTTGATTGCTACCAATTAG 1281 0.4575 MKQPTPPKKPWIPFTANCCTTEDKTIFRNFSRCRPSRSEYSKDIAPLPSFRRLSFSDLSRSSSARINEDLAQSFGSDLWDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDNLRAGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMSRGSLENHLFRRLTSLPWATRLKIAAGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLATMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNIVDWSKPYLSSSRRLRYIMDPRLSGQYSVKGSKEMAHLALQCISLNPKDRPRMAMIVETLESLQQFKDMAVTSGHWPTSSPKSTTRNGASNKVRARGVNQKKPSTPVPTKKSLIATN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0715 426 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 34 411 - -
Lja2g0715 426 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
Lja2g0715 426 SUPERFAMILY Protein kinase-like (PK-like) 75 370 IPR011009 -
Lja2g0715 426 PANTHER OS01G0588500 PROTEIN-RELATED 34 411 - -
Lja2g0715 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Lja2g0715 426 Gene3D Transferase(Phosphotransferase) domain 1 176 384 - -
Lja2g0715 426 MobiDBLite consensus disorder prediction 380 426 - -
Lja2g0715 426 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0715 426 Gene3D Phosphorylase Kinase; domain 1 55 175 - -
Lja2g0715 426 CDD STKc_IRAK 99 372 - -
Lja2g0715 426 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0715 Lja-Chr2 6521650 6525482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0715 81 409 Glycoside Hydrolase AT3G07070 48.512 2.08e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lja2g0715 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0715 - - lang:109333209 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0715 2 6521650 6525482 Lja2g0715 2 6521650 6525482 ECH