Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0710 ATGACAGAGGAAGTTGCAGCCTCAGAGCATGAGAAATTTGAAGTCAAGTTCACTAGAAAAAGTGTTGTAAAAGCTGTAAATCCTTCACCAGAGTCATTTTCAGTTGTCACCCTCTCAAATCTTGACCTCCTCTCAGGTCGTTTTCCTATTACATACTTGTATTTCTACCGCAAACCAAAACAAGGTAACTTCAAAGCTTTTGTTGAAACTCTTAAAATCTCTCTAGCACAATTACTTGATCACTATTATCCCTTTGCTGGCCAAATTATTCAAAATCCCAAAACTAGTGAACCTGAAATAATTTGTGACAACAATGGTTCTCTAGTCATTGAAGCTCAAGCAAACACACCACTACACAATTTAGATTTTTACGATCTCAATGAAACTCTTCAAGAAAAAATTGTCTCAATTCAACCAGATTTCCCCTTTCAAATTCAGGTGACAGAGTTCACTTGTGGTGGCATTTCATTAGCATTTAGCTTTGACCATGCACTAGGTGATGCAACTTCCTTTGGTAAATTCATCACCTCATGGTGTGACATAGCACAAAACAAGCCATTGTCATTCACACCAGACCACACTAGACACCTCCGAGCACGTTCTCCTCCAAAATATGAATCTTCTTTAGACCAAACTTTCATGAGGTGCACCATGGAAGAGATACAGAACATGCCGGTGTACCGCATTAATAAAATAAAACGCCTTTATCATATCAATGTATCAAGTATTAAAATGTTGCAGGAGCTTGCTTCTAAGGGCACCAAGAGGACAAAGATTGAAGCTTTCTCTGCATATGTGTGGAAGAAAATGATTGCCACTATTGATGATGAAAAATGCAAGATGGGTTGGTTGGTGGATGGAAGAAAAAGAATGTGTAGAGGTAACAATTCCATGTCTAATTACATTGGCAATGTTCTTTCTGTGGCTTTTGGGGAGGCAAGTGTTGAAGAATTGAAAGAAGGGTCATTATCAGAAATTTGTGACATGGTGCATGAGGCAATTTCTAAGGTGAGCAATGAGGCCCATTTCTTGGATTTGATTGATTGGGTTGAGTGCCACAGGCCTGGTTTGATGCTGGCTAAGGCAGTGTTGGGCCTGGAGGGCCCGGGCCTCGTTGTGTCTTCAGGACAAAGATTTCCTATCTCTGAAGTTGAGTTTGGATTTGGGCCCCCTTTGCTGGGGACAGTGTACACTTCCATTGAAGGAGTGGGAGTTGGTTACATGAACCAAAGGCCTAGTGCTCAGGGTGATGGTTCCTGGACTGTGTCTGCTATCTTGTGGCCTGAAATGGTAGCTGCACTGGAAGATGACCCAATTTTCATCCCCATGACGGCTGCTCATCTTCAACTTAAATGCTTTGAAGATGAATAA 1371 0.4136 MTEEVAASEHEKFEVKFTRKSVVKAVNPSPESFSVVTLSNLDLLSGRFPITYLYFYRKPKQGNFKAFVETLKISLAQLLDHYYPFAGQIIQNPKTSEPEIICDNNGSLVIEAQANTPLHNLDFYDLNETLQEKIVSIQPDFPFQIQVTEFTCGGISLAFSFDHALGDATSFGKFITSWCDIAQNKPLSFTPDHTRHLRARSPPKYESSLDQTFMRCTMEEIQNMPVYRINKIKRLYHINVSSIKMLQELASKGTKRTKIEAFSAYVWKKMIATIDDEKCKMGWLVDGRKRMCRGNNSMSNYIGNVLSVAFGEASVEELKEGSLSEICDMVHEAISKVSNEAHFLDLIDWVECHRPGLMLAKAVLGLEGPGLVVSSGQRFPISEVEFGFGPPLLGTVYTSIEGVGVGYMNQRPSAQGDGSWTVSAILWPEMVAALEDDPIFIPMTAAHLQLKCFEDE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0710 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 35 447 - -
Lja2g0710 456 Pfam Transferase family 14 438 - -
Lja2g0710 456 Gene3D - 218 436 IPR023213 -
Lja2g0710 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 447 - -
Lja2g0710 456 Gene3D - 12 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0710 Lja-Chr2 6502751 6504430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0710 39 435 Monolignol Biosynthesis Gene Families AT5G48930 26.379 1.42e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0710 - - gmx:100795616 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0710 2 6502751 6504430 Lja2g0710 2 6502751 6504430 ECH