Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0707 ATGGAGAGCACAAGAACAGGCCAATGGTTAAACCTTCTAGCGTGCTTATTGCTATTGCTGAAGGCAGAAGCTTCATATGTACCAATTACTTTAGTCCGGAACGCGGTAGCAAAAGGAGCTGTTTGTTTGGATGGTAGTCCACCAGCTTACCATTTTGATAAGGGATATGGAGCAGGGATTAACAGTTGGTTAGTTGCTTTTGAGGGAGGAGGATGGTGCAACAATGTCACCACTTGCCTTGGTCGCAAGAACAACCGTTTAGGTTCATCCAAGAAAATGGCCAACCAAATTGCCTTTTCTGGAATTTTACACAACAGGAAACAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGATATTGTGATGGGTCATCATTTACTGGTGATGTGGAAGCAGTCAATCCAGTAACTAAATTGCATTTCAGAGGAGCAAGGATTTTTGCTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGCTATTATCTCTGGATGTTCAGCTGGAGGATTGACTTCAGTACTGCATTGTGATCGCTTTCGAGCTCTATTACCGAGAGGAGCTAAAGTGAAATGCCTCTCAGATGCTGGTTACTTCATCAATGCAAGGGATGTCTCTGGATCAAGTTACATTAAACAGTACTTCACTCAAGTTGTTATCACACATGGCTCTGCAAGGAATTTGCCTCAATCATGCACTTCAAGAATCAGTCCAGGGCTGTGCTTTTTCCCGCAATATTTGGTATCACAAATCACTACACCAATCTTCTTTGTAAACGCGGCATACGACTCGTGGCAGATAAAGAACATATTGGCGCCGGGTGTAGCTGATCCTAGTGGCCATTGGCATAGCTGCAAGATGGATATTAACAACTGCTCACCTGATCAACTTGATCTAATGCAAGGCTTCAGGACAGAATTCTTAAGGGCATTGACTGTGCTAGGAAACTCTCCATCTAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACAGAAATGCAGGAGACATGGTTCACAAGTGACTCTCCTGTGGTTAACAAGACAACGATTGCAAAGGCTGTAGCAGACTGGTTTTATGAAAGAAGGCTCTTCCATCAGATAGATTGCCCTTACCCTTGCAATCCCACTTGTCACAACCGCGTTTTCGAACCCCCACAAGACCATCCAGGAAAAAATGTGACAACCAAAGGAACTTCAGGTGCATCAGCTAGAAGACCCAGTTTTCCTAAACTATCAGACAAGGCAAAATGGATTGAGCTTTTGTGCATTAGACAAGGGATCAGTGGGCTTCTATTACCTTTGGTTATTCTGGTTATCCTATAG 1350 0.4289 MESTRTGQWLNLLACLLLLLKAEASYVPITLVRNAVAKGAVCLDGSPPAYHFDKGYGAGINSWLVAFEGGGWCNNVTTCLGRKNNRLGSSKKMANQIAFSGILHNRKQFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARIFAAVIEDLLAKGMKNARNAIISGCSAGGLTSVLHCDRFRALLPRGAKVKCLSDAGYFINARDVSGSSYIKQYFTQVVITHGSARNLPQSCTSRISPGLCFFPQYLVSQITTPIFFVNAAYDSWQIKNILAPGVADPSGHWHSCKMDINNCSPDQLDLMQGFRTEFLRALTVLGNSPSKGMFIDSCYAHCQTEMQETWFTSDSPVVNKTTIAKAVADWFYERRLFHQIDCPYPCNPTCHNRVFEPPQDHPGKNVTTKGTSGASARRPSFPKLSDKAKWIELLCIRQGISGLLLPLVILVIL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0707 449 MobiDBLite consensus disorder prediction 393 416 - -
Lja2g0707 449 PANTHER PECTIN ACETYLESTERASE 3 408 - -
Lja2g0707 449 PANTHER NOTUM-RELATED 3 408 IPR004963 GO:0016787
Lja2g0707 449 SUPERFAMILY alpha/beta-Hydrolases 142 272 IPR029058 -
Lja2g0707 449 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0707 Lja-Chr2 6475812 6483162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0707 5 398 Carbohydrate Esterase AT4G19420 62.937 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0707 K19882 - gmx:100776478 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0707 2 6475812 6483162 Lja2g0707 2 6475812 6483162 ECH