Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0705 ATGAAGAACACCAACGACGACGTTTCCGCACAAGATCTCGACCCTCAAAGCGATCACAGCTCCGATTACTTAGCACACTCTCACCAATTGTCTCAGCCGCAGCCTCGCCGCCCCCGCGGCTTCGCCGCGGCGGCAGCGGGGGTCAATTCCGCCGGAAAGGGGAAGAAGGAGAGGGAGAAAGAAAAGGAGCGGACGAAGCTCCGGGAGCGGCACCGCCGTGCCATCACTAGCCGCATGCTCGCCGGACTCCGTCAGTATGGCAATTTCCCTCTGCCGGCGCGTGCGGACATGAACGACGTGCTCGCTGCTCTCGCGCGTGAGGCTGGTTGGGTCGTCGACGCCGATGGCACCACCTATCGCCAGTGTCCCCCTCCTTCTCACATGGGATCATTTGCCGCAGCGAGGTCAGTCGAAACTCAACTCTCTGCTGGTTCCTTGAGAGCTTGCTCCGTTAAGGAAACGTTAGAGAATCAGCCGCCAGTTCTTAGAATTGATGAATGCTTGTCGCCTGCGTCCATTGATTCTGTTGTACTTGCAGAAAGGGACTCGAAGAGTAGGAAGTTCGCGAGTGCGAGCCCCATCGATTCAGTTGACTGCTTGGAAGCTGATCAGCTTATGCAAGTTATGCATACTGGGGTGCATGAAAATGACTTTACTGGCACGCCATACGTTCCTGTTTACATAAAGCTTCCAGTTGGTATTATCAACAAATTTTGTCAGTTGATTGATCCTGAAGGCATTAGACAGGAGCTAATCCATATTAAGTCTTTAAATATAGACGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCTCAGAAATATGTGTGGTCTGGTTATAGGGAGCTATTTAACATTATAAGAGAATTCAAGCTGAATTTACAGGTTGTTATGGCATTCCATGAATGTGGAGGGAGTGATTCTAGTGATGCATTGATTTCCCTCCCGCAATGGGTTTTGGATATTGGAAAAGACAACCAAGATATATTCTTCACGGATCGTGAAGGACGGAGGAATACTGAATGCCTATCTTGGGGAATTGACAAAGAACGGGTTCTCAAAGGCAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTCCGTACTGAGTTTGATGACCTATTTGCCGAAGGTCTGATTTCTTCAGTAGAAATTGGACTAGGAGCATCTGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGAATGGGATGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTGCAACACAGTCTACGCAGAGCTGCCAAATTACGTGGTCACTCTTTCTGGGCTAGAGGGCCGGATAATGCTGGACACTACAACTCTATGCCGCATGAAACTGGATTCTTTTGCGAGCGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTGCATTGGTACTCCCAGACATTAGTAGACCATGCGGATAATGTTTTGTCTCTTGCAAGCCTTGCTTTTGAGGAAACACAAATAATTGTTAAGGTTCCTGCAGTATACTGGTGGTATAAGACACCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCCACAAATCAGGATGGGTATTCGCCTGTGTTTGAGGTTCTGAAAAAACATGCCGTCACGATGAAATTTGTCTGCTTAGGATTTCATCTTTCCAGCCAGGAAGCTAATGAATCATTGGTTGATCCTGAGGGTTTGAGTTGGCAAGTATTAAACTCAGCTTGGGATCGGGGGTTGATTGCCGCCGGAGAGAATGCACTCCTTTGCTATGATAGAGAAGGGCACAAGAGATTAGTTGAGATGGCAAAGCCCAGAAATGATCCAGATCGCCGGCACTTCTCATTCTTTGTGTATCAGCAACCGTCTTTGCTTCAGGGAAATCCTTGCTTGTCAGAATTGGATTTCTTCATCAAATGCATGCATGCTATCCTTGCAGGTGAAATGACAGGGGATTTGTAA 1983 0.4766 MKNTNDDVSAQDLDPQSDHSSDYLAHSHQLSQPQPRRPRGFAAAAAGVNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQCPPPSHMGSFAAARSVETQLSAGSLRACSVKETLENQPPVLRIDECLSPASIDSVVLAERDSKSRKFASASPIDSVDCLEADQLMQVMHTGVHENDFTGTPYVPVYIKLPVGIINKFCQLIDPEGIRQELIHIKSLNIDGVVVDCWWGIVEGWSPQKYVWSGYRELFNIIREFKLNLQVVMAFHECGGSDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISSVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLVDHADNVLSLASLAFEETQIIVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLKKHAVTMKFVCLGFHLSSQEANESLVDPEGLSWQVLNSAWDRGLIAAGENALLCYDREGHKRLVEMAKPRNDPDRRHFSFFVYQQPSLLQGNPCLSELDFFIKCMHAILAGEMTGDL* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 258 272 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 574 596 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 518 529 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 467 486 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 536 559 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 279 297 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 501 517 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 301 322 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 394 416 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 SUPERFAMILY (Trans)glycosidases 218 650 IPR017853 -
Lja2g0705 660 MobiDBLite consensus disorder prediction 52 69 - -
Lja2g0705 660 MobiDBLite consensus disorder prediction 1 69 - -
Lja2g0705 660 PANTHER - 57 653 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 Pfam Glycosyl hydrolase family 14 242 626 IPR001554 GO:0000272|GO:0016161
Lja2g0705 660 Gene3D Glycosidases 214 657 - -
Lja2g0705 660 Pfam BES1/BZR1 plant transcription factor, N-terminal 52 200 IPR008540 -
Lja2g0705 660 PANTHER BETA-AMYLASE 8 57 653 - -
Lja2g0705 660 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0705 Lja-Chr2 6456889 6461813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0705 12 650 Glycoside Hydrolase AT5G45300 65.172 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lja2g0705 Glyco_hydro_14 6.6e-85 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0705 K01177 - gmx:100777004 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0705 2 6456889 6461813 Lja2g0705 2 6456889 6461813 ECH