Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0704 ATGAAGTTTTTCTCTGACATGTTTCCTGCATCTTCATTTTGGTTATACCTTCTCTTTAGTTTCAACCTTTGCCTAAACGCAACTGCCTTATCTACCTCCAAAAACCAAACAGATCATATAGCATTGCTCAAATTCAAGGAATCAATATCCAGTGATCCATCTGGAATCCTAGAATCTTGGAATAGTTCAACCCATTTCTACAAGTGGCATGGAATCACATGCAACTTCAAGCACCTAAGAGTAACAGAGTTGAACTTAACAGAGTACCAGTTGCATGGATCATTGTCTCCTCATGTGGGTAATCTCTCTTTTCTCACAAAACTCGCCCTCGGAAAAAACAGCTTTCACGGAAATATTCCACAAGAACTGGGTCGGTTGTCACGGTTGCAACAACTCTACCTCTCTAACAACTCCTTTGCAGGGGAGATTCCAACAAACTTAACAGGTTGCTTTAATCTCAAAGCCTTAGCCTTAAATGGAAATAATTTGATTGGCAAGATACCAATTGAATTCGGGTCTCTTCAGATGCTTCAAGTTTTGAGGGTATATATAAACAATTTAACCGGTGGAGTCCCATCATTCATCGGGAACCTTTCATCCTTAACATCTCTCTCGGTGGGTATGAATAACTTGGAGGGAAATATTCCACAAGAAATATGCCGCCTTAAAAACTTTACAATTCTATTTGCGGGTGAGAACAAATTGTCAAGTGCATTTCCTTCTTGTCTTTACAACATGTCATCTCTTATTTTCTTCGAAGTTGGAGGCAATGAATTTGATGGCACTCTTCCACCCAATATTTTCCACACCCTCAGCAATATTCAACATTTTGTAATTGGCGGCAACCAAATCTCAGGTTCAATCCCGACTTCTATTGTTAATGCCTCTACACTTTCACAACTTGAAATCTCTGAAAACAATTTCACTGGACAAGTTCCAAGTCTAGGGAAGTTGCAAGATCTTGGGTCCCTAAATTTGGAAACCAACCATCTAGGTGGAAATTCAACTAAAGATTTGGATTTTTTGAAATCATTGACAAATTGTAGTAAGTTGGAAATGCTAAGTATAGCCTACAACAATTTTGGTGGTCCGTTACCAAATTATGTGGGCCATTTATCCACCCAACTAAGTCAACTATTTCTTGGGGGTAATCACATATCAGGAAAAATTCCCGTGGGATTAGGAAATCTTACTAACCTAATTCTTTTGACCATGGAAAGTAATCACTTTGAAGGGACTATTCCGGTTGCTTTTGGAAAGTTTCAGAAGATGCAAATGTTAGATTTGTCGGGAAACAAGATGTCAGGAGATATACCAACCTCCATTGGCAACCTCACTCAATTGTTTTATTTGGGTCTAGGACAAAATAAGTTACAAGGAAATATTCCTCCTAGTATAGGAAAATGTCAAAAGTTGCAATACCTAAATCTTTCACAAGACAACCTTAAAGGAATCACACCTGTTGAAGTTTATAGTCTTTCCTCATTAACAAACTTATTGGACTTGTCACACAACTCATTCAATGGTACTCTACCAGAAGATCTCGGAAAACTTAAAAATATTGATTGGGTAGATGTCTCTGAGAATCAACTGTCGGGTGATATTCCTGGCAACATTGGAGAATGCACAAGCTTGGAGTACCTTTTTTTACAAGGGAATTTCTTCAATGGAAAAATACCATCCTCTTTAACTTCACTCAAAGGTCTTAAACGTTTAGATCTTTCACGAAACAACTTATCTGGATCAATTCCTCAGGATATGCAGAACAGTTTGTTTTTGGAGTACTTCAATGTTTCATTCAACATATTGGACGGAGAAGTGCCAACAAAAGGTGTCTTTAAAAATGCAAGTGCATTAGTGGTGACCGGAAATAGAAAGCTATGTGGAGGCATTTCAGAGCTGCATCTACTGCCATGCCCTGTCAAAGGTATAAAGCATGCAAAACACCATAATTTCATGTTGATAGCAGTGGTGGTAAGTGTTGTGGCTTTTCTTCTCATTCTGTCATTTATTCTAACCATGTACTTGATGAAGAAAAGGAACAAGAAATCATCTTCTGATACACCAACAATTGACCAGCTGGCTAAGATTTCATACCACGATCTGCATCGTGGAACCGGTGGGTTCTCAGCTAGAAACTTGATTGGTTTAGGAAGTTTTGGTTCCGTGTACAGAGGAAATATTGTGTCAGAAGATAAAGATGTAGCCATAAAGGTGCTAAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCACTAAAAAATATTAGACATCGAAATCTGGTTAAGATCTTAACATGTTGTTCCAGCACGGACAACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGAGTACATGAACAATGGAAGCTTAGAGCAGTGGTTGCATCGAGGGAGTGGAAGTGTAGAGCTGCATGAACCACTGGACCTTGAGCAAAGATTAAGTATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCAAGAATGTGAGCAGTTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGAAGACATGGTCGCTCATGTGAGTGATTTTGGCACAGCAAGACTTGTGTCAATAGTTGATGGTACTTCTCACAAGCAAACTAGTACAATTGGAATAAAAGGGACTGTTGGCTATGCTCCACCAGAGTATGGAGTTGGTTCTGAAGTGTCCACATGTGGCGACATATATAGCTTTGGGATTCTTATATTGGAAATGCTTACCGGAAGAAGACCTACATATGAATTGTTTGAAAACGGTCAAAATCTACATAAGTTCGTGGAAATTTCATATCCTGATAGTATTTTACAGATTTTGGACCCGCATCTTGTATCAAGAGTGGAAGATGCATCAGGAGGAGAGAACAAAGGGAATCTTACTCCAAATTCTGAGAAGTGCTTAATATCACTGTTTGGGATTGGACTTGCTTGTTCAGTGGACTCACCAAAACAAAGGATGAACATAGTGGATGTTATTAGAGAGCTAAACATTATCAAAAAGGGATTTCTTGTTGATGTGGACTAA 3060 0.3856 MKFFSDMFPASSFWLYLLFSFNLCLNATALSTSKNQTDHIALLKFKESISSDPSGILESWNSSTHFYKWHGITCNFKHLRVTELNLTEYQLHGSLSPHVGNLSFLTKLALGKNSFHGNIPQELGRLSRLQQLYLSNNSFAGEIPTNLTGCFNLKALALNGNNLIGKIPIEFGSLQMLQVLRVYINNLTGGVPSFIGNLSSLTSLSVGMNNLEGNIPQEICRLKNFTILFAGENKLSSAFPSCLYNMSSLIFFEVGGNEFDGTLPPNIFHTLSNIQHFVIGGNQISGSIPTSIVNASTLSQLEISENNFTGQVPSLGKLQDLGSLNLETNHLGGNSTKDLDFLKSLTNCSKLEMLSIAYNNFGGPLPNYVGHLSTQLSQLFLGGNHISGKIPVGLGNLTNLILLTMESNHFEGTIPVAFGKFQKMQMLDLSGNKMSGDIPTSIGNLTQLFYLGLGQNKLQGNIPPSIGKCQKLQYLNLSQDNLKGITPVEVYSLSSLTNLLDLSHNSFNGTLPEDLGKLKNIDWVDVSENQLSGDIPGNIGECTSLEYLFLQGNFFNGKIPSSLTSLKGLKRLDLSRNNLSGSIPQDMQNSLFLEYFNVSFNILDGEVPTKGVFKNASALVVTGNRKLCGGISELHLLPCPVKGIKHAKHHNFMLIAVVVSVVAFLLILSFILTMYLMKKRNKKSSSDTPTIDQLAKISYHDLHRGTGGFSARNLIGLGSFGSVYRGNIVSEDKDVAIKVLNLQKKGAHKSFIAECNALKNIRHRNLVKILTCCSSTDNKGQEFKALVFEYMNNGSLEQWLHRGSGSVELHEPLDLEQRLSIIIDVASALHYLHQECEQLVIHCDLKPSNVLLDEDMVAHVSDFGTARLVSIVDGTSHKQTSTIGIKGTVGYAPPEYGVGSEVSTCGDIYSFGILILEMLTGRRPTYELFENGQNLHKFVEISYPDSILQILDPHLVSRVEDASGGENKGNLTPNSEKCLISLFGIGLACSVDSPKQRMNIVDVIRELNIIKKGFLVDVD* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0704 1019 Gene3D Phosphorylase Kinase; domain 1 690 790 - -
Lja2g0704 1019 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Lja2g0704 1019 Gene3D Ribonuclease Inhibitor 190 343 IPR032675 -
Lja2g0704 1019 PANTHER LRR RECEPTOR-LIKE KINASE 25 1015 - -
Lja2g0704 1019 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Lja2g0704 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Lja2g0704 1019 SUPERFAMILY L domain-like 374 629 - -
Lja2g0704 1019 CDD STKc_IRAK 715 1010 - -
Lja2g0704 1019 Gene3D Ribonuclease Inhibitor 35 189 IPR032675 -
Lja2g0704 1019 SUPERFAMILY L domain-like 37 331 - -
Lja2g0704 1019 ProSiteProfiles Protein kinase domain profile. 709 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0704 1019 SUPERFAMILY Protein kinase-like (PK-like) 682 1008 IPR011009 -
Lja2g0704 1019 SMART LRR_typ_2 126 150 IPR003591 -
Lja2g0704 1019 SMART LRR_typ_2 445 469 IPR003591 -
Lja2g0704 1019 SMART LRR_typ_2 493 518 IPR003591 -
Lja2g0704 1019 SMART LRR_typ_2 566 589 IPR003591 -
Lja2g0704 1019 SMART LRR_typ_2 198 222 IPR003591 -
Lja2g0704 1019 Pfam Leucine rich repeat 400 458 IPR001611 GO:0005515
Lja2g0704 1019 Gene3D Transferase(Phosphotransferase) domain 1 791 1014 - -
Lja2g0704 1019 PANTHER OS04G0122200 PROTEIN 25 1015 - -
Lja2g0704 1019 Pfam Leucine Rich Repeat 569 588 IPR001611 GO:0005515
Lja2g0704 1019 Gene3D Ribonuclease Inhibitor 344 635 IPR032675 -
Lja2g0704 1019 Pfam Protein kinase domain 712 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0704 1019 SMART serkin_6 709 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0704 Lja-Chr2 6436428 6441000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0704 35 1014 Receptor kinase-like Gene Family AT3G47570 45.628 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lja2g0704 Pkinase 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0704 - - gmx:100785561 1323.15