Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0703 ATGAAGCTTTTTCCTCTCATGTTTCCTGCATCTTTATTTTGGTTATACCTTATTCTCTTTACTTTCAAACACTGCCCAAAAACAACTGCTTCTATTTCCAGAAACCAAACAGACCATCTAGCATTGCTCAAATTCAAGGAACAAATCTCTTATGACCCATATGGAATTCTAGATTCATGGAATCATTCTACCCACTTTTGCATGTGGCATGGAATTACATGCAGCTCCAAGCACCGAAGAGTGCACCGAAGAGTAACAGAGTTGAGCTTAACAGGGTATCAGTTGCATGGATCATTGTCTCCTCATGTTGGCAATCTCTCTTTTCTCACAAAACTCTACCTCCAAGAAAACAACTTTCACGGAAATATCCCACAAGAATTGGGTCGGTTGGTACTGTTGCAGGTGTTGTATCTCACTAATAACTCCTTTACAGGGGAGATTCCTACAAACCTAACAACTTGCTTTGATCTCAAAGGTTTGGGCTTAGGTGGAAATAATCTGACTGGCCAGATACCGATTGAAATTGGCTCTCTCCAGAAACTTCAAGTATTGGAACTTGCGGTAAACAATTTAACTGGTGAAGTCCTTCCATTCATAGGGAATCTTTCATTCTTAACTTATTTCTTGGTGAGATATAATAACTTGGAGGGAAATATTCCAGAAGAAATATGTCGCCTCAAAAACTTGGCATATCTACAAGTGAGTGTGAACAAATTTTCAGGTACATTTCCTCCTTGTTTTTACAACATGTCATCTCTTATTCTCTTCTCAGCTGGAGTAAATGAATTTGATGGCTCTCTTCCACCCAACATGTTTCACACCCTCCCCAATCTCAAACTTTTTATCATTGGCGGGAATCGAATCTCAGGTCCAATCCCCACTTCTCTTTCAAATGCTTCAAACCTTGATTACCTTGAAATTAGTGAAAACAATTTCATCGGACAAGTTCCAAGTGTAGAGAAGCTGCAACATCTTCGGTGGGTACAAATGTTTTCTAATCATCTAGGTAACAAATCAACTAATGATTTGGACTTTCTGAAATCACTCACGAATTGTAGTAAGTTGCAACATCTGGTTATAGCCGATAACAATTTTGGAGGTCCTTTGCCAAATTCCGTGGGCAATTTATCATCCCAACTCAGTTACCTTGGCCTTGGGTATAATTACATATCGGGAAAAATTCCTGTTGAATTAGGAAATCTAATTAACCTAACTCTCTTGGACTTGAAAAGTAACCACTTTGAAGGGACAATTCCGGTTGCTTTTGGGAAGTTTCAGAAGATGCAATTATTAGATTTGGGGGGAAATAAGGTGTCAGGAGATATTCCAGCCTCCCTTGGAAACCTAACTCAGTTGTTTCATTTGGGTTTAGAGGAAAACAACTTAGAAGGAAATATTCCTCCAAGTATTGGAAACTGTCAAAAGTTACAATACTTAAACCTTTCAAGAAACAACCTCAAAGGAACCATACCTGTTGAGGTTTTTAATCTGTCCTCATTAACAAATTTACTAGACTTGTCACACAACTCACTGAGTGGCAGTCTGCCAAAAGAAGTGGGAAGGCTAAAAAATATTGATTGGCTAGATGTCTCTGAGAATCAACTATCAGGCGATATTCCAGGAGCCATTGGAGAATGCATGAAGTTGGAGTACCTTTATTTACAAGGAAATTCCTTCCATGGAATCATAACATCATCTTTGCCTTCACTCAAAGGTCTTATACGATTAGATCTATCACGAAACCGCTTATCTGGGTCAATTCCTAAGGATCTACAGAATATTTCCTATTTGGAATACTTCAATGTTTCCTTCAACATGTTGGAGGGAGAAGTACCAACAAAAGGTGTCTTTCAAAATGTCAGTGCATTAGCGATGACGGGAAACAAAAAACTTTGTGGGGGTATTCCAGAGCTGCATTTACTGCCATGTCCCGTCAAAAGTATGAAGCATGTAAAACACCATAGTTTCAAGTGGATAGCAGTGGTAGTTAGTCTGGTTGTCTTTCTTCTCATGTTGTCATTTGTTCTAACCATCTACTGGATGAGGAAAAGAAACAAGAAACAGTCTTCTGATACACCAACAATTGACCAACTGGCTAAGATTTCATACCACGACCTACATCATGGAACCGGTGGATTCTCAGCTGGAAACTTGATAGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATATTGTGTCAGCAGATAAAGATGTTGCCATAAAGGTCTTGAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATCAGACATCGGAATCTGGTTAAGATCTTAACATGCTGTTCCAGCACAGACAACAGAGGTCAAGATTTTAAAGCTTTAGTTTTTGAGTACATGAAAAATGGAAGCTTAGAACAATGGCTGCATCCAGGGAATGGAAGTGAAGAGCTTCGTGAACCACTTGACCTTGAACAAAGATTAAGTATCATTGTTGATGTTGCTTCTGCATTACATTATCTGCATCAAGAATGTGAGCAAGTGGTCCTTCATTGTGATATAAAGCCAAGCAATGTCCTTCTTGACGAAGACATGGTCGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACTATTGATGGTTCATCTGACCAGCAAAGTAGTACGATCGGAATAAAAGGGACTCTTGGCTATGCTGCTCCTGAGTATGGAGTGCTTTCTGAAGTGTCCACATGTGGCGACATATATAGCTTCGGGATCCTTGTATTGGAAATGCTTACTGGAAGAAGACCTACAGATGAATTGTTTGAAGATGGCCAAAATCTGCATAAGTTTGTGGAAATTTCATTTCCTGATAATCTTTTACACATTTTGGACCCACGTCTTGTATCAAGACTTGAAGAAGCAATAGAAAGAAAAAACAGAGGGAATCATACTCCAAATTCTGAGAAGTGCTTAATATCACTTTTTAGGATTGGACTTGCTTGTTCAATGGAATCACCAAGAGAAAGGATGAAGATAGTGGATGTCATTAGAGAGCTAAACATAATCAAAAAGCTATTTCTTGTTGGTGTTCCTGCTCGTGTCTATGCAGCATAG 3090 0.39 MKLFPLMFPASLFWLYLILFTFKHCPKTTASISRNQTDHLALLKFKEQISYDPYGILDSWNHSTHFCMWHGITCSSKHRRVHRRVTELSLTGYQLHGSLSPHVGNLSFLTKLYLQENNFHGNIPQELGRLVLLQVLYLTNNSFTGEIPTNLTTCFDLKGLGLGGNNLTGQIPIEIGSLQKLQVLELAVNNLTGEVLPFIGNLSFLTYFLVRYNNLEGNIPEEICRLKNLAYLQVSVNKFSGTFPPCFYNMSSLILFSAGVNEFDGSLPPNMFHTLPNLKLFIIGGNRISGPIPTSLSNASNLDYLEISENNFIGQVPSVEKLQHLRWVQMFSNHLGNKSTNDLDFLKSLTNCSKLQHLVIADNNFGGPLPNSVGNLSSQLSYLGLGYNYISGKIPVELGNLINLTLLDLKSNHFEGTIPVAFGKFQKMQLLDLGGNKVSGDIPASLGNLTQLFHLGLEENNLEGNIPPSIGNCQKLQYLNLSRNNLKGTIPVEVFNLSSLTNLLDLSHNSLSGSLPKEVGRLKNIDWLDVSENQLSGDIPGAIGECMKLEYLYLQGNSFHGIITSSLPSLKGLIRLDLSRNRLSGSIPKDLQNISYLEYFNVSFNMLEGEVPTKGVFQNVSALAMTGNKKLCGGIPELHLLPCPVKSMKHVKHHSFKWIAVVVSLVVFLLMLSFVLTIYWMRKRNKKQSSDTPTIDQLAKISYHDLHHGTGGFSAGNLIGSGSFGSVYKGNIVSADKDVAIKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCSSTDNRGQDFKALVFEYMKNGSLEQWLHPGNGSEELREPLDLEQRLSIIVDVASALHYLHQECEQVVLHCDIKPSNVLLDEDMVAHVSDFGIARLVSTIDGSSDQQSSTIGIKGTLGYAAPEYGVLSEVSTCGDIYSFGILVLEMLTGRRPTDELFEDGQNLHKFVEISFPDNLLHILDPRLVSRLEEAIERKNRGNHTPNSEKCLISLFRIGLACSMESPRERMKIVDVIRELNIIKKLFLVGVPARVYAA* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0703 1029 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Lja2g0703 1029 Gene3D Ribonuclease Inhibitor 336 652 IPR032675 -
Lja2g0703 1029 CDD STKc_IRAK 719 1014 - -
Lja2g0703 1029 PANTHER OS04G0122200 PROTEIN 25 1021 - -
Lja2g0703 1029 Gene3D Phosphorylase Kinase; domain 1 694 794 - -
Lja2g0703 1029 SUPERFAMILY Protein kinase-like (PK-like) 686 1012 IPR011009 -
Lja2g0703 1029 Gene3D Ribonuclease Inhibitor 194 265 IPR032675 -
Lja2g0703 1029 SUPERFAMILY L domain-like 378 633 - -
Lja2g0703 1029 PANTHER LRR RECEPTOR-LIKE KINASE 25 1021 - -
Lja2g0703 1029 SMART serkin_6 713 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0703 1029 Gene3D Transferase(Phosphotransferase) domain 1 795 1018 - -
Lja2g0703 1029 Gene3D Ribonuclease Inhibitor 266 326 IPR032675 -
Lja2g0703 1029 Pfam Protein kinase domain 716 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0703 1029 SMART LRR_typ_2 497 522 IPR003591 -
Lja2g0703 1029 SMART LRR_typ_2 449 473 IPR003591 -
Lja2g0703 1029 SMART LRR_typ_2 570 593 IPR003591 -
Lja2g0703 1029 SMART LRR_typ_2 130 154 IPR003591 -
Lja2g0703 1029 SMART LRR_typ_2 401 424 IPR003591 -
Lja2g0703 1029 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Lja2g0703 1029 SUPERFAMILY L domain-like 36 335 - -
Lja2g0703 1029 Gene3D Ribonuclease Inhibitor 35 193 IPR032675 -
Lja2g0703 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Lja2g0703 1029 Pfam Leucine rich repeat 475 535 IPR001611 GO:0005515
Lja2g0703 1029 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Lja2g0703 1029 Pfam Leucine rich repeat 403 462 IPR001611 GO:0005515
Lja2g0703 1029 ProSiteProfiles Protein kinase domain profile. 713 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0703 Lja-Chr2 6430677 6434501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0703 35 1018 Receptor kinase-like Gene Family AT3G47570 46.647 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lja2g0703 Pkinase 5.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0703 - - gmx:100785561 1286.55