Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0702 ATGAAGCCTTTTTCTCTCTTGTTTTCTGCATCTTCATTTTGGCTATGCAGCCTTCTCTTTACTTTCAACCTTTGCTCAAACGTAACTGCTTCTACTTCAAGAAACCAAACAGATCATTTGGCATTGCTCAAATTCAAAGAATCAATATCCAGTGATCCATATGGAATGCTAGAATCTTGGAATAGTTCTACCCACTTCTGCAAGTGGCATGGAATCACATGCAGCCCCGCGAATCAAAGGGTTACAGAGTTGAAGCTAAGAGGATATCAGTTGCACGGATCCTTGTCTCCTCATGTTGGCAATCTCTCTTTTCTGAGGAACATCGACCTCGGAAACAACAGCTTCCATGGAGATATCCCACAAGAATTGGGCCGGTTGTCACAGTTGCAAGGACTCACCCTCACCAATAACTCCTTTGAAGGGGAGATTCCGAAAAACTTAACAAGTTGCTTTGGTCTCAAATCCTTAAACTTAGGTGGAAATAATTTGATTGGCAAGCTACCGATGGAAATTGGCTCTCTTCAGAAACTTCAAGCATTGGAGGTTGCGAAAAATAAGTTAACCGGTGGATTTTTTCCATTCATAGGGAATCTTTCATCCTTAACATTTCTCTCGATGAATCTTAATGAGTTGGAGGGAAATATTCCACAAGAAATATGCTGCCTAAAAAATCTGACATTTCTACAAGTGGGTGCCAACAAATTGTCTGGTACATTTCCTTCTTGTCTTTACAACATGTCATCTCTTATTTTGTTCTCAGCAGCAGGCAATGAATTTGATGGCTCACTTCCACCCAACATGTTCCACACCCTCCCTAATCTCAAAATTCTTACAATTGGCAAGAATCAAATCTCAGGTCCAATCCCCACTTCTGTTGCAAATGCTTCTACCCTTGCACATCTTGATATCAGTCAAAACAATTTCATCGGGCAAGTTCCAAGTCTAGGGAAGCTGCAAAATCTTTGGAGGTTAAATTTGGAACACAACAATCTAGGTGGCAATTCAACTAACAATTTGGATTTCTTAAACTCATTGACAAATTGTAGTAAGTTATTTGGGATCTCTATATTAGATAACAATTTTGGAGGCCCTTTGCCAAATTCTGTGGGAAATTTATCCAATCAAATCAGTTTACTGTATCTTGGGTATAATCACATAACAGGAAAAATTCCTGTTGAATTAGGAAATCTAATTAACCTAAATCTTTTGGTCATGCAATCTAACTACTTTGAAGTGGCTATACCTATTGCTTTTGGGAAGTTTCAGAATATGCAAGTATTAGACTTGAGTAAAAACAAGCTGTCAGGAGAAATACCGGCCTCCATTGGAAATATCACTCAATTGTTTGATTTGGGATTAGGACAAAATAAGTTAGAAGGAAATATTCCTCCAAGTATACGCAACTGTCAAAAGTTACAATACCTAAGCATTTCACAAAACAACCTTAAAGGAAACATACCTGTTGAGGTCTTCAGTATTTCCTCATTAACAAACTTACTGGACTTGTCACACAACTCTCTCAATGGCATTTTGCCGGTAGAAGTGGGAAGACTAAAAAATATTGAGTGGCTTGATTTCTCTGAGAATCAACTGTCAGGTGATATTCCTGGAACTGTTGGAGAATGCGTGAGCTTGGAGTTCCTTTTTTTACAAGGGAATTCCTTCCATGGAATCATACCATCCCCTTTGGCTTCCCTCAAAGGTCTTCGACGTTTAGATCTTTCACGAAATCATTTGTCTGGATCAATTCCTAAGGACATGCAGAATGTTTCATTTTTGGAATACTTAAATGTAATTTCATTCAACATGTTGGAGGGAGAAGTGCCAACAAAAGGTGTCTTTCAAAATGCAAGTGCATTAGCCGTGACTGGAAACAAAAATCTTTGTGGAGGTATTTTAGAGCTGCATTTACTGCCATGTCCTGTCAAAGGTATGAAACCTCCAAAACACCATAATTTCAAGTTTATAGCAGTGGTAGTAAGTACTAGGGTTGCTTTTCTTCTCATTCTGTCATTTATTTTAACCATCAACTGGATGAGGAAAAGAAACAAGAAACAGTCTTCTGATTCACCAACAATTGACCAGTTGGCAAAGATTTCATACCATGACCTACATCATAGAACCGATGGATTCTCAGCTGGAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATATTGTGTCAGGAGATAAAGATGTTGCCATAAAGGTCTTGAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACATCGGAATCTGGTTAAGATCTTAACATGCTGTTCCAGCACAGACAACAGAGGTCAAGATTTTAAAGCTTTAGCTTTTGAGTATATGAAAAATGGAAGCTTAGAACAATGGCTGCATCCAGGGAATGGAAGTGAAGAGCTTCGTGAACCACTTGACCTTGAACAAAGATTAAGTATCATTGTTGATGTTGCTTCTGCATTACATTATCTGCATCAAGAATGTGAGCAAGTGGTCCTTCATTGTGATATAAAGCCAAGCAATGTCCTTCTTGATGAAGACATGATCGCTCATGTGAAGTATGGAGTGGGTTCTGAAGTGTCCACATGTGGCGACATATATAGCTTCGGGATCCTTGTATTGGAAATGCTTACTGGAAGAAGACCTACAGATGAATTGTTTGAAGGCGGCCAAAATCTGCATAAGTTTGTGGCAATTTCACTTTCTGATAATCTTTTACAGATTTTAGACCCACATCTTGTATCAAGAGTTGAAGAAGCAATAGAAGGAGAAAACAGAGGGAACCTTACTCCAAATTCTGAGAAGTGCTTAATATCACTTTTTAGGATTGGACTTACTTGTTCAATGGAATCACCAAGAGAAAGGATGAAAATAGTGGATGTCATTAGAGAGCTAAACATTATCAAAAAGCTATTTCTTGTGGGTGAGATCATTTTAGAATTTTAA 2976 0.3824 MKPFSLLFSASSFWLCSLLFTFNLCSNVTASTSRNQTDHLALLKFKESISSDPYGMLESWNSSTHFCKWHGITCSPANQRVTELKLRGYQLHGSLSPHVGNLSFLRNIDLGNNSFHGDIPQELGRLSQLQGLTLTNNSFEGEIPKNLTSCFGLKSLNLGGNNLIGKLPMEIGSLQKLQALEVAKNKLTGGFFPFIGNLSSLTFLSMNLNELEGNIPQEICCLKNLTFLQVGANKLSGTFPSCLYNMSSLILFSAAGNEFDGSLPPNMFHTLPNLKILTIGKNQISGPIPTSVANASTLAHLDISQNNFIGQVPSLGKLQNLWRLNLEHNNLGGNSTNNLDFLNSLTNCSKLFGISILDNNFGGPLPNSVGNLSNQISLLYLGYNHITGKIPVELGNLINLNLLVMQSNYFEVAIPIAFGKFQNMQVLDLSKNKLSGEIPASIGNITQLFDLGLGQNKLEGNIPPSIRNCQKLQYLSISQNNLKGNIPVEVFSISSLTNLLDLSHNSLNGILPVEVGRLKNIEWLDFSENQLSGDIPGTVGECVSLEFLFLQGNSFHGIIPSPLASLKGLRRLDLSRNHLSGSIPKDMQNVSFLEYLNVISFNMLEGEVPTKGVFQNASALAVTGNKNLCGGILELHLLPCPVKGMKPPKHHNFKFIAVVVSTRVAFLLILSFILTINWMRKRNKKQSSDSPTIDQLAKISYHDLHHRTDGFSAGNLIGSGSFGSVYKGNIVSGDKDVAIKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCSSTDNRGQDFKALAFEYMKNGSLEQWLHPGNGSEELREPLDLEQRLSIIVDVASALHYLHQECEQVVLHCDIKPSNVLLDEDMIAHVKYGVGSEVSTCGDIYSFGILVLEMLTGRRPTDELFEGGQNLHKFVAISLSDNLLQILDPHLVSRVEEAIEGENRGNLTPNSEKCLISLFRIGLTCSMESPRERMKIVDVIRELNIIKKLFLVGEIILEF* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0702 991 Pfam Leucine Rich Repeat 569 589 IPR001611 GO:0005515
Lja2g0702 991 Gene3D Ribonuclease Inhibitor 268 345 IPR032675 -
Lja2g0702 991 Pfam Protein kinase domain 714 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0702 991 SMART serkin_6 711 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0702 991 Gene3D Transferase(Phosphotransferase) domain 1 864 980 - -
Lja2g0702 991 Gene3D Ribonuclease Inhibitor 165 267 IPR032675 -
Lja2g0702 991 Gene3D Transferase(Phosphotransferase) domain 1 793 863 - -
Lja2g0702 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Lja2g0702 991 PANTHER OS04G0122200 PROTEIN 863 985 - -
Lja2g0702 991 PANTHER OS04G0122200 PROTEIN 25 862 - -
Lja2g0702 991 SUPERFAMILY L domain-like 376 630 - -
Lja2g0702 991 ProSiteProfiles Protein kinase domain profile. 711 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0702 991 Gene3D Ribonuclease Inhibitor 37 152 IPR032675 -
Lja2g0702 991 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Lja2g0702 991 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Lja2g0702 991 SUPERFAMILY L domain-like 36 331 - -
Lja2g0702 991 SUPERFAMILY Protein kinase-like (PK-like) 684 976 IPR011009 -
Lja2g0702 991 Gene3D Ribonuclease Inhibitor 346 644 IPR032675 -
Lja2g0702 991 PANTHER LRR RECEPTOR-LIKE KINASE 863 985 - -
Lja2g0702 991 PANTHER LRR RECEPTOR-LIKE KINASE 25 862 - -
Lja2g0702 991 Gene3D Phosphorylase Kinase; domain 1 673 792 - -
Lja2g0702 991 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0702 Lja-Chr2 6426527 6429711 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0702 35 983 Receptor kinase-like Gene Family AT3G47570 44.032 0.0 772
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lja2g0702 Pkinase 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0702 - - gmx:100785561 1256.12