Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0701 ATGTCATTGCATTCATTTTCTTTGGAATCAATCCTTGCACACTCTTTAGAAGTGAATCATTCTATCCGAGACGGTCAAAGTTTAGTTTCAGCAAGTGGAAATATTGAAGCCGGTTTCTTCAGCCCCGGGAATTCAACGCGTAAATACTTGGGTGTGTGGTACAGGAACGTGTCTCCTTTAACAGTGGTATGGGTGGCCAACCGAGAAAAACCTCTGCAGAACAACTCTGGAGTTTTAAAACTCAATCAAAACGGGATTCTTCTGCTTCTCGACGGCGCAAACAACAGTACTCTCTGGTCATCCAATATATCAGCAGCAGGGAATAATAACCCAGTAGTGGCCGCTCAGCTACTGGATTCAGGAAATTTGGTAGTGAAAAATGCCAACAACGACAGCTTTCTGTGGCAGAGTTTTGATTATCCCTGTGACACTTTGATGCCGGGAATGAAGCTTGGATGGAACTTAGAAACTGGTCTAGAGAGATTTCTGTCATCTTGGAAAAGCACGGATGACCCTGCCAAGGGAGAATACACAATGAGAATTGACCATAGAGGATATCCACAAGTGTTTGCATTCAAGGGGTCTGATATAATTTCTAGAACAGACCAGTGGAACGGCGAGTCTCTTCGTGGATATCCTGCTCCAGATCCAAAATACAATCAAACATTTGTGTTCAACGAAAAAGAGGTGTATTATGAGTTCGAGTTTCTTGAAAGTTCGGCTGCCAGCTTGTATAGACTCTTCCCTTCAGGTGATGGGGAGGTTATATCTTGGACAATTGGATCAGGTAACAGCCGGCAAGTCGTCACAAAAGCGGGCTTAGATGAATGCGACAAATACGCCTATTGCGGTGCAAATTCTATATGCAGTGCTAACGGTTACGTTGCAACTTGTGAATGCTTGAAAGGATATGCTCCCAAGTCTCCTCAACAGTGGAGTTTACAGAATTGGACTGACGGCTGTGTTCCCAGGAATAAAACTATTTGCAAAAACAGTTACACGGATGGTTTCTGGACTTATACGTATTCGAAATTGCCAGACACGTCTTCGTCTTGGTTCAATAAGACCATGAACCTTGAGGAATGTAAGGTGTTGTGTCTCAGAAACTGTTCCTGTGTAGCATATGCAAACTTATATGTTACTAACGGGGGAACTGGGTGTCTACTTTGGTTTCATAATATGGTTGACGTCAGGAAATACTCTCAACGGGGACAAGATCTTTATGTTAGAGTCCCACCTTCAGAACTAGATCAAGTTGCAGCGGATGACAATGGAAACACCAAGAAGAAGATAGCGGGAATCACAGTTGGTGTGATTATTTTTGGATTCATGACATGTTTATCCATATTGATAATTAAAAATCCAGGGGCTGCAAGAAATATTTACAACAAGCATTGCAAAAATAAACCGAGAAAGGAAGATGTTGATTTGCCAATATTCAATTTGTCAGCCTTAGCTCATGCCACTGACAACTTTTCAAGTAGTAATAAACTTGGAGAAGGTGGCTTTGGACCAGTATATAAGGGCATATTGATAGATGGACAAGAGATAGCAGTGAAGAGACTTTCAAAAAAGTCTGGACAAGGGTTGGAAGAGTTTAAAACTGAAGTAGCGTTGATTGCTAAACTTCAACACCGTAATCTCGTAAAGCTTCTCGGTTGTTGCATTAAAGGAGAAGAAAAGATGTTGATCTATGAATACATGCCCAATAAAAGCTTGGACTACTTTGTTTTTGATGAAACCAAAAAGATGTCATTGGATTGGATTAAGCGTTTCAACATTATTGGAGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCTAGGCTGAGGATTATTCATAGAGATTTGAAAACTAGCAATATATTGCTAGATGCCAATTTCAATTCGAAAATATCTGACTTTGGGTTGGCTCGATTATTTTTGGGAGACCAAATTGAAGCTAACACAAATAGGGTCGCTGGAACATATGGGTACATGCCTCCCGAGTATGCTGTGCGTGGACATTTTTCAGTGAAATCAGATGTCTTTAGTTACGGTGTGATCGTACTGGAGATTGTAAGCGGGAAAAAGAACAGGGAATTTTCAGACCCAAAACATGACCATAATCTTCTTGGATATGCGTGGAAATTATGGAGTGAAGAGAGAGCGCTAGAACTATTGGATGAAGTGTTAAGGGAGCAATGCACACCCTTCGAAGTCATACGATGCATACAAGTAGGCCTGTTGTGCGTGCAACAAAGGCCGGAAGATAGACCAGACATGTCATATGTGGTTCTGATGCTAAATGGTGAGAAATTATTGCCACAACCCAAAGTTCCTGGTTTTTATACTGAAAGGGATGTTAGACTCAAATCACATTCGTGGTCAGAAAATCATAAACTGTGCTCAGCTAATGAAGTAACCATCACAGAGTTAGATGCGAGATAG 2433 0.4127 MSLHSFSLESILAHSLEVNHSIRDGQSLVSASGNIEAGFFSPGNSTRKYLGVWYRNVSPLTVVWVANREKPLQNNSGVLKLNQNGILLLLDGANNSTLWSSNISAAGNNNPVVAAQLLDSGNLVVKNANNDSFLWQSFDYPCDTLMPGMKLGWNLETGLERFLSSWKSTDDPAKGEYTMRIDHRGYPQVFAFKGSDIISRTDQWNGESLRGYPAPDPKYNQTFVFNEKEVYYEFEFLESSAASLYRLFPSGDGEVISWTIGSGNSRQVVTKAGLDECDKYAYCGANSICSANGYVATCECLKGYAPKSPQQWSLQNWTDGCVPRNKTICKNSYTDGFWTYTYSKLPDTSSSWFNKTMNLEECKVLCLRNCSCVAYANLYVTNGGTGCLLWFHNMVDVRKYSQRGQDLYVRVPPSELDQVAADDNGNTKKKIAGITVGVIIFGFMTCLSILIIKNPGAARNIYNKHCKNKPRKEDVDLPIFNLSALAHATDNFSSSNKLGEGGFGPVYKGILIDGQEIAVKRLSKKSGQGLEEFKTEVALIAKLQHRNLVKLLGCCIKGEEKMLIYEYMPNKSLDYFVFDETKKMSLDWIKRFNIIGGIARGLLYLHQDSRLRIIHRDLKTSNILLDANFNSKISDFGLARLFLGDQIEANTNRVAGTYGYMPPEYAVRGHFSVKSDVFSYGVIVLEIVSGKKNREFSDPKHDHNLLGYAWKLWSEERALELLDEVLREQCTPFEVIRCIQVGLLCVQQRPEDRPDMSYVVLMLNGEKLLPQPKVPGFYTERDVRLKSHSWSENHKLCSANEVTITELDAR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0701 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 807 - -
Lja2g0701 810 SMART blect_4 19 141 IPR001480 -
Lja2g0701 810 Pfam Protein tyrosine and serine/threonine kinase 495 761 IPR001245 GO:0004672|GO:0006468
Lja2g0701 810 Gene3D Phosphorylase Kinase; domain 1 465 567 - -
Lja2g0701 810 Pfam S-locus glycoprotein domain 200 308 IPR000858 GO:0048544
Lja2g0701 810 ProSiteProfiles PAN/Apple domain profile. 329 412 IPR003609 -
Lja2g0701 810 Gene3D - 9 138 IPR036426 -
Lja2g0701 810 SUPERFAMILY Protein kinase-like (PK-like) 476 780 IPR011009 -
Lja2g0701 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Lja2g0701 810 Pfam PAN-like domain 329 397 IPR003609 -
Lja2g0701 810 Gene3D Transferase(Phosphotransferase) domain 1 568 770 - -
Lja2g0701 810 CDD STKc_IRAK 498 765 - -
Lja2g0701 810 ProSiteProfiles Bulb-type lectin domain profile. 13 138 IPR001480 -
Lja2g0701 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 172 IPR036426 -
Lja2g0701 810 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 11 807 - -
Lja2g0701 810 ProSiteProfiles Protein kinase domain profile. 492 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0701 810 SMART serkin_6 492 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0701 810 SMART ntp_6 332 411 IPR003609 -
Lja2g0701 810 Pfam D-mannose binding lectin 61 167 IPR001480 -
Lja2g0701 810 CDD B_lectin 19 141 IPR001480 -
Lja2g0701 810 Pfam Domain of unknown function (DUF3403) 769 810 IPR021820 GO:0004674
Lja2g0701 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Lja2g0701 810 ProSiteProfiles EGF-like domain profile. 273 310 IPR000742 -
Lja2g0701 810 CDD PAN_AP_plant 330 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0701 Lja-Chr2 6414243 6425242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0701 488 810 Receptor kinase-like Gene Family AT4G23140 55.389 8.17e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja2g0701 PK_Tyr_Ser-Thr 8.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0701 - - gmx:100776576 1142.87