Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja2g0685 | ATGGCGGCTCGATCGACCCGTATTGCTATCGTCAACAACGACCGGTGCAAGCCCAACAAGTGCCGCCAGGAGTGTAAGAAGAGTTGCCCCGTTGTCAGAACCGGTAAAAGGTGTATTGAGGTGTCTGCTACGTCGAAGATTGCTGATATATCTGAGGACATGTGCATTGGATGCGGTATTTGTGTTAAGAAATGTCCTTTTGAAGCCATCCAGATTATCAACTTGCCTAAGGATTTGGACAAAGACACCACTCATAGATATGGTCCTAATACTTTTAAGCTGCATAGGCTGCCGGTGCCGAGGCGAGGGCAAGTGCTTGGATTGGTTGGGGCTAATGGAATTGGGAAGTCCACTGCCCTTAAAATATTGGCTGGAAAATTGAAACCAAACTTGGGTCGTTTCACTAACCCCCCTGATTGGCAGGAAATTTTAACCTACTTTCGAGGATCTGAATTGCAGGATTACTTTACTCGTTTTCTAGAGGATAATTTGAAGGTTAGCATCAAGCCTCAGAATGTTGACAACCTTCCAAAAGACGTGCAAGGGAATGTGGGGAAGTTGTTAAAGCAGAATGATGAGAGAGATATAATGTCGGAGCTTTGTGCTGATCTGGAGCTTAACCAGGTTTTGGATCTTAATGTTGGTGATCTTTCAGGTGGTGAGCTCCAAAGGTTTGCCATTGCGATTGCTGCCATGAAGAATGCTGATATATACATGTTTGATGAACCTTCAAATTATCTTGATGTGAAACAGAGGCTGAAAGCTGCCCAAGTCATCCGATCATTGCTCAAGCATAATAACTATGTAATTGTCGTAGAGCACGATCTTAGTGTCTTGGACTACTTATCAGACTTTATTTGCTGTTTGTATGGCAAACCTGGTGCATATGGAGTGGTCACCCTTCCTTTCTCAGTCAGAGAAGGAATCAACATCTTCTTGGCTGGGTTTGTTCCAACAGAAAATCTTAGGTTCCGTGCTGAATCTCTTACGTTCAAGGTTGCTGAGACTCCCCAGGAAAGTGCTGAAGAAACTCAAACATATGCGCGATACAGATACCCAACCATGACCAAAACTCGAGGCAAGTTCGAGCTTCGTGTTGTTGAGGGAGAATTTACTGATTCTCAAATTATTGTGATGCTGGGTGAGAACGGGACAGGAAAGACCACATTTATTCGTATGCTGGCTCAGGCTGGTTCTGATACGGAGATGCCTCAGTTTAATGTTTCATACAAGCCCCAGAAGATTAACCCTAAGTTCGAATCAACTGTTAGACACTTGCTGCACCGTGAAATTCGTAATACATATACTGATCCCCAGTTTGTATCAGATGTTATGAAGCCACTTCTTATCGAACGGTTAATGGACCAAGAAGTTAAAAAACTTTCTGGTGGAGAGTTGCAAACCGTTGCCTTGTGTCTTTGTCTTGGAAAGCCTGCAGACATCTATCTGATAGATGAGCCAAGTGTATCTCTTGATTCTGAACAGCGAATTCGTGCTGCCAAAGTCATTAAGAGGTTTATTCTTCATGCAAAGAAAACAGCTTTTGTGGTTGAGCACGATTTCATCATGGCAAATTATCTTGCTGACAAAGTTATTGTTTTTGAGGGTAAACCTTCAAGGGATTGTATTGCAAACTCCCCACAATCATTGTTGTCTGGCATGAACCTTTTCTTATCACGTCTTGATATAACGTTTAGAAGAGACCCAACTAACTTTCGTCCTAGGATCAACAAAATTGATTCAGCAAAGGACAGAGAACAAAAGGCTGCTGGGTCTTACTATCTTCGTGACTAA | 1794 | 0.4287 | MAARSTRIAIVNNDRCKPNKCRQECKKSCPVVRTGKRCIEVSATSKIADISEDMCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRRGQVLGLVGANGIGKSTALKILAGKLKPNLGRFTNPPDWQEILTYFRGSELQDYFTRFLEDNLKVSIKPQNVDNLPKDVQGNVGKLLKQNDERDIMSELCADLELNQVLDLNVGDLSGGELQRFAIAIAAMKNADIYMFDEPSNYLDVKQRLKAAQVIRSLLKHNNYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRAESLTFKVAETPQESAEETQTYARYRYPTMTKTRGKFELRVVEGEFTDSQIIVMLGENGTGKTTFIRMLAQAGSDTEMPQFNVSYKPQKINPKFESTVRHLLHREIRNTYTDPQFVSDVMKPLLIERLMDQEVKKLSGGELQTVALCLCLGKPADIYLIDEPSVSLDSEQRIRAAKVIKRFILHAKKTAFVVEHDFIMANYLADKVIVFEGKPSRDCIANSPQSLLSGMNLFLSRLDITFRRDPTNFRPRINKIDSAKDREQKAAGSYYLRD* | 598 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja2g0685 | 597 | SMART | AAA_5 | 102 | 294 | IPR003593 | - | |
Lja2g0685 | 597 | SMART | AAA_5 | 373 | 539 | IPR003593 | - | |
Lja2g0685 | 597 | Gene3D | - | 336 | 596 | IPR027417 | - | |
Lja2g0685 | 597 | ProSitePatterns | 4Fe-4S ferredoxin-type iron-sulfur binding region signature. | 55 | 66 | IPR017900 | - | |
Lja2g0685 | 597 | Pfam | Possible Fer4-like domain in RNase L inhibitor, RLI | 6 | 37 | IPR007209 | - | |
Lja2g0685 | 597 | ProSitePatterns | ABC transporters family signature. | 217 | 231 | IPR017871 | GO:0005524 | |
Lja2g0685 | 597 | ProSiteProfiles | 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. | 46 | 75 | IPR017896 | - | |
Lja2g0685 | 597 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 348 | 561 | IPR003439 | GO:0005524 | |
Lja2g0685 | 597 | PRINTS | ABC transporter family E signature | 79 | 99 | IPR013283 | - | |
Lja2g0685 | 597 | PRINTS | ABC transporter family E signature | 24 | 39 | IPR013283 | - | |
Lja2g0685 | 597 | PRINTS | ABC transporter family E signature | 156 | 182 | IPR013283 | - | |
Lja2g0685 | 597 | PRINTS | ABC transporter family E signature | 52 | 76 | IPR013283 | - | |
Lja2g0685 | 597 | PRINTS | ABC transporter family E signature | 140 | 156 | IPR013283 | - | |
Lja2g0685 | 597 | PRINTS | ABC transporter family E signature | 107 | 132 | IPR013283 | - | |
Lja2g0685 | 597 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 364 | 535 | IPR027417 | - | |
Lja2g0685 | 597 | Gene3D | - | 1 | 332 | IPR027417 | - | |
Lja2g0685 | 597 | CDD | ABC_RNaseL_inhibitor_domain1 | 78 | 332 | IPR034348 | - | |
Lja2g0685 | 597 | Pfam | ABC transporter | 367 | 488 | IPR003439 | GO:0005524 | |
Lja2g0685 | 597 | PANTHER | - | 1 | 596 | - | - | |
Lja2g0685 | 597 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 1 | 596 | IPR013283 | - | |
Lja2g0685 | 597 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 85 | 289 | IPR027417 | - | |
Lja2g0685 | 597 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 70 | 315 | IPR003439 | GO:0005524 | |
Lja2g0685 | 597 | Pfam | 4Fe-4S binding domain | 50 | 71 | IPR017896 | - | |
Lja2g0685 | 597 | SUPERFAMILY | 4Fe-4S ferredoxins | 10 | 85 | - | - | |
Lja2g0685 | 597 | Pfam | ABC transporter | 102 | 245 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja2g0685 | Lja-Chr2 | 6199201 | 6202742 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja2g0685 | 97 | 279 | Calmodulin-binding Proteins | AT2G36910 | 27.551 | 7.81e-07 | 50.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja2g0685 | K06174 | - | gmx:100797423 | 1033.86 |