Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0669 ATGACCATTGATATGCTCCCATCCGGGGCTCAAAGCGTGAGGACAAACAGATCTTCATTTGGCTCTGGCAATGGGGATACCCCTTTGCACAATTATGCCACTGTTAGCAACGGGGATGGCTATGACAGTGACGGTAGCAATTTCGCGCCAGCCACACCAACAACTCTATCGATGGCTATTCCAGCAGAACTCGCTGGAGCTGTACCCTTGATTGATAGATTCCAGGTGGAAGGATTTCTAAAATTGATGCAAAAACAAATTCAATCTGCTGGCAAACGAGGATTTTTTTCTAAAAGGTCTGTGGGCCCCCAAGTTCGAGAGAAACTCACATTAGAAGACATGCTTTGCTTCCAAAAGGATCCAATACCTACATCATTGCTTAAGTTGAATGGTGATCTAGCAAGTCGGGCAACAAAATTATTCCAGATAATTTTGAAATATATGGGAGTTGATTCATCTGATCGTGTAACTCCAATAGGCTTAGAAGAACGAGTTGAGCTTGTAAGTAAACTATACAAGCAAAGTTTGAAGCGTTCAGAACTCCGGGACGAACTTTTTGTCCAGATATCAAAACAAACTAGAAACAACCCAGACAGGGAATACTTGATCAAAGCATGGGAGCTAATGTATTTATGTGCGTCGTGCATGCCTCCAAGTAAAGACATTGGAGGGTATCTGTCAGATTATATTCATAATGTGGCACACGGTGTTACTACTGATCCTGAGATCAGAGCCCGGGCATTAAATACACTAAATGCTTTGAAGCGCACTGTCAAGGCTGGTCCTAGGTATATAATACCTGGGGCTATAGAGATTGAAGCTCTGTTGACTGGGAAAAGGCTTACAACTATAGTGTTCTTCCTAGATGAAACATTTGAAGAAATTACATATGATATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCAGGGATCATTAAACTGCCAACGTTCTCTAGCTTTAGCCTGTTTGAATGTCATAAAGTTGTTACCGGCTCCAAATCACCTGATACTGGGAATGAGGAGTACATTGGATTAGATGATAATAAGTATATTGGTGATCTCCTGGCGGAATTTAAGGCAGTGAAAGACCGAAGTAAAGGAGAAATTTTGCACTGTAAGCTGATATTCAAGAAAAAATTATTTCGTGAATCAGATGAAGCTGTGACCGATCAAATGTTCTTGCAGTTGTCCTATGTACAATTGCAGCATGATTACATTTTGGGTAATTATCCTATTGGAAGGGATGATGCTTCCAAGCTCTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCCTGCACCGAGTGGAATTCATTTCTGGAGCGTTTTCTGCCTAGACAAATTGCAATGACTCGAGCCAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGAGCATGTCACGAAAGACGATGCAAGACAACAATTTCTGCATACATTGAGAACACTTCCTTATGGGTTTTCTGTTTTTTTCAATGTTCGCAAAATTGATGATCCCATTGGACTCCTGCCTGGACGAATAATATTAGGAATTAACAAGAGAGGGGTTCATTTTTTTCGGCCCATTCCCAAGGAGTATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGTAATACTGCAGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTGCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGCAGATATTCCAAAGCACGATCTCCTACTGCGGGTTCTTTGAATGAAGATGTTTCTAGTAACTTTAAGCCTCCGAATCTGGAATTATATGAAAAACGTGTTCAAGATTTATCAAAACTTGTTGAAGAGTCTCAGAGTAATGCTGACCAAATGTTGGAAAAACTGCATGAGAAGCAAAAACAAGAAGAGGTAATGCTACAAGAATTAGAGAGCTTGAAAGAATCTTTGAGAGCTGGTAAGCATAGTCTCACAGAAGTTACAAATGAACGTGATAGGCTTAGATCATTATGCGACGAAAAGGATAAGGCACTTCAGGCTAAAATTCTTGAGAAAAGATCCATGGAAGAAAAGATGGCCAAAATGAGTAATTTGGTGATAGAGAGCACCACCAAAAAGGACCATAACGAAGCAAATGATCAAGTCTTACGAAAACTTGAAGATGACTTACAACTTTGTAAAGATGAGTGTCTTGTAGCTGAAGAGACTATCAAAAGCTTGATTGATGAAAAGTTGATTTTGACACAGAAGCTATCTGAGCTGGAGGAGAATAATGCTGATGAGATTAGTTCTCTTCAATGGAAACTTGAGCAAGAACGTAAAGCTGTAAATTCTCGAGTTTATGATCTTGAAAGAAAACTGGATTTGTTAAAGCAAGAGTTAGTTGTGGCCGAGTCTGCACTCTCATTAAAGGACTCTGAATTGGCTGCTATAAAGAAGGATTTAAAAGAGCTAGAAGAGTTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGCACAAACAGCTGCCATATTGAAGATGCAAGGGGCTCAATTAGCTGAAATGGAAACACTTTATAAAGAAGAGCAGATTCTCAGGAAGCGATACTTTAATACCATAGAAGATATGAAAGGAAAAATAAGAGTTTACTGTAGGCTAAGACCTCTTGTTGAAAAAGAGATTGCTGACAAAGAAAGAGATGTTCTTGCAACGGTAGATGAGTTTACAGTTGAGCATCCGTGGAGAGATGATAAACCAAAACAGCATATATATGACCGCGTGTTTAACGGTGATGCCACTCAGGAAGAAGTATTTGAGGATACAAGGTACTTGGTGCAATCTGCAGTAGACGGCTATAATGTTTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTATGGATCTGAAAACAATCCCGGGCTTACGCCTCGTGCTACGGCAGAGCTTTTTAGAATTTTAAGGAGAGATAATAACAAATTTTCTTTTTCCTTGAAGGCATATATGTTGGAACTATATCAAGATACACTTGTAGATCTTCTGTTACCTAAAAGCGCGAAGCGATTAAAATTGGAGATTAAGAAGGATTCAAAGGGAATGGTAACTGTAGAAAACGTAACGACTGTGTCAATTTCTACTATGGAAGAATTAAATAGCATAATACAAAGGGGATCAGAACGGCGGCATACATCAGGGACTCAAATGAATGAAGAAAGCTCAAGATCTCATCTTATAATGTCCATTGTAATTGAAAGCATCAACCTTCAAAGTCAATCAGCTGCAAGGGGAAAGCTAAGTTTTGTGGATCTTGCTGGCTCAGAAAGAATAAAAAAGTCAGGCTCTGAGGGTAATCAGCTCAGAGAAGCTCAGAGTATAAACAAATCATTATCAGCACTTGGAGATGTTATTAGTGCTTTATCTTCTGGTGGTCAGCACATACCTTACAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGGGGCAATGCAAAAACTCTTATGTTTGTCAATGTATCTCCAATAGAATCAAGCTTGGATGAGACACATAACTCCCTAATGTATGCGTCACGAGTGAGATCAATCGTGAATGATCCAAGCAAGAATGTTAGTTCAAAAGAGATTATGCGGCTGAAGAAACAAGTTGCATATTGGAAGGAGCAAGCAGGTAGGAGAGGAGAGGAAGAAGATTTAGAAGAAATTCAAGAAGTACGACCAACTAAAGAGAAGACTGACAACCGCCATTCTCTGTAA 3804 0.3954 MTIDMLPSGAQSVRTNRSSFGSGNGDTPLHNYATVSNGDGYDSDGSNFAPATPTTLSMAIPAELAGAVPLIDRFQVEGFLKLMQKQIQSAGKRGFFSKRSVGPQVREKLTLEDMLCFQKDPIPTSLLKLNGDLASRATKLFQIILKYMGVDSSDRVTPIGLEERVELVSKLYKQSLKRSELRDELFVQISKQTRNNPDREYLIKAWELMYLCASCMPPSKDIGGYLSDYIHNVAHGVTTDPEIRARALNTLNALKRTVKAGPRYIIPGAIEIEALLTGKRLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLPTFSSFSLFECHKVVTGSKSPDTGNEEYIGLDDNKYIGDLLAEFKAVKDRSKGEILHCKLIFKKKLFRESDEAVTDQMFLQLSYVQLQHDYILGNYPIGRDDASKLSALQILAEIGFVRRPESCTEWNSFLERFLPRQIAMTRAKREWELDILSCYHSLEHVTKDDARQQFLHTLRTLPYGFSVFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSPTAGSLNEDVSSNFKPPNLELYEKRVQDLSKLVEESQSNADQMLEKLHEKQKQEEVMLQELESLKESLRAGKHSLTEVTNERDRLRSLCDEKDKALQAKILEKRSMEEKMAKMSNLVIESTTKKDHNEANDQVLRKLEDDLQLCKDECLVAEETIKSLIDEKLILTQKLSELEENNADEISSLQWKLEQERKAVNSRVYDLERKLDLLKQELVVAESALSLKDSELAAIKKDLKELEELREMKEDIDRKNAQTAAILKMQGAQLAEMETLYKEEQILRKRYFNTIEDMKGKIRVYCRLRPLVEKEIADKERDVLATVDEFTVEHPWRDDKPKQHIYDRVFNGDATQEEVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILRRDNNKFSFSLKAYMLELYQDTLVDLLLPKSAKRLKLEIKKDSKGMVTVENVTTVSISTMEELNSIIQRGSERRHTSGTQMNEESSRSHLIMSIVIESINLQSQSAARGKLSFVDLAGSERIKKSGSEGNQLREAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMYASRVRSIVNDPSKNVSSKEIMRLKKQVAYWKEQAGRRGEEEDLEEIQEVRPTKEKTDNRHSL* 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0669 1267 SUPERFAMILY Second domain of FERM 379 496 IPR035963 -
Lja2g0669 1267 MobiDBLite consensus disorder prediction 1238 1267 - -
Lja2g0669 1267 Gene3D - 1215 1263 - -
Lja2g0669 1267 Pfam FERM central domain 387 501 IPR019748 -
Lja2g0669 1267 Coils Coil 734 775 - -
Lja2g0669 1267 PRINTS Kinesin heavy chain signature 1113 1131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0669 1267 PRINTS Kinesin heavy chain signature 963 984 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0669 1267 PRINTS Kinesin heavy chain signature 1162 1183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0669 1267 PRINTS Kinesin heavy chain signature 1082 1099 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0669 1267 ProSiteProfiles Kinesin motor domain profile. 891 1212 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0669 1267 SUPERFAMILY PH domain-like 501 589 - -
Lja2g0669 1267 Gene3D - 499 606 IPR011993 -
Lja2g0669 1267 SMART B41_5 277 501 IPR019749 -
Lja2g0669 1267 Coils Coil 619 667 - -
Lja2g0669 1267 MobiDBLite consensus disorder prediction 1 36 - -
Lja2g0669 1267 Pfam Kinesin motor domain 897 1212 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0669 1267 ProSiteProfiles FERM domain profile. 281 595 IPR000299 GO:0005856
Lja2g0669 1267 Gene3D MyTH4 domain 96 278 IPR038185 -
Lja2g0669 1267 Gene3D - 394 494 IPR014352 -
Lja2g0669 1267 ProSiteProfiles MyTH4 domain profile. 117 276 IPR000857 GO:0005856
Lja2g0669 1267 ProSitePatterns Kinesin motor domain signature. 1112 1123 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja2g0669 1267 PANTHER KINESIN-RELATED 612 1260 IPR027640 GO:0003777|GO:0007018
Lja2g0669 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1242 IPR027417 -
Lja2g0669 1267 Gene3D Kinesin motor domain 878 1214 IPR036961 -
Lja2g0669 1267 CDD FERM_C_KCBP 499 604 - -
Lja2g0669 1267 CDD FERM_B-lobe 396 494 IPR019748 -
Lja2g0669 1267 Gene3D - 280 384 - -
Lja2g0669 1267 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 612 1260 - -
Lja2g0669 1267 SMART MyTH4_1 117 276 IPR000857 GO:0005856
Lja2g0669 1267 CDD KISc_C_terminal 889 1214 - -
Lja2g0669 1267 SUPERFAMILY Prismane protein-like 834 895 IPR011254 GO:0003824|GO:0016491
Lja2g0669 1267 SMART kinesin_4 889 1220 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g0669 1267 Pfam MyTH4 domain 170 274 IPR000857 GO:0005856
Lja2g0669 1267 Coils Coil 791 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0669 Lja-Chr2 6056721 6066433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0669 49 1263 Calmodulin-binding Proteins AT5G65930 73.520 0.0 1822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0669 - - gmx:100782701 2157.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0669 2 6056721 6066433 Lja2g0669 2 6056721 6066433 ECH