Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0663 ATGTTTCTTCTTCTACTTTTTCCTACACTCAAGCGTCTCAGCCGCCGGAATTTCCTCACCGCCGCCGCCGCCGTCATTCTGCTACTCTTCTCGGCAGCAAGCTCCGCCGCACCCTTGACTCACGTTCTGGGTCCCTTCAACCTCACCAACTTCAACTTATTCAACGTGGTGTCCAACGCGACGGTCAACCAAGGCGCACTCCAGATCACGCCGGACACCGCCGGCAGCAACTCGGTGGTCAGCCTCCCCAACAACTCCGGCAGAGTGCTCTTGAAGGAACCGTTCACTCTCTGGGAAGATGGCAAAAACGGGAAGCTCGCTTCCTTCAACACTTCCTTCCTCATCAACATCTTCCGCGTCAACAATGCCACTCCCGGCGAAGGCCTCGCCTTCCTCATCGCCCCTGACACCACCATCCCTGCCAACAGCTACGGCCGTTACCTCGGCCTCACCAACGCCTCCACCGACGGAAACTCCTCCAACCGCTTCATCGCCGTCGAGCTCGACACCGTGAAGCAGAGGTTCGACCCCGACGATAACCACCTCGGGCTTGACATCAACAGCGTCGTCTCCAACATCACCGTCCCCCTGACCCCGCTCGGTTTCCAGATCGCTCCAAACGGGACTCAATTCTTCGTAGTCTGGATCCAATACGACGGTGGCCGGAGGCGGATTGAAGTCTACATGGCGGAGCAGCCGTCTCCGGATGTTCCGGTGGTGGCGAAGCCGTCTAAGCCGTTGTTGAATTCGACTCTTGATCTGAAAGCTATAGTGAACCAGAAATCCTACTTCGGATTCTCTGCTTCAACAGGGGTAACCATTGAATTGAACTGTGTACTGAGATGGAACGTTTCAATTGATGATTTCAAAAAGAGTGATGGTGGAAACGGGTTGAAAATTGGTTTGGGTGTTGGGTTAGGTTTAGGGTTTGTGATTGTGGCGGTTATTGGTGGATTACTGTGGTGGATTAGGTTGAAGAAGAAGAGGGAAGAAGGGTCTAATTCTCAGATTCTGGGGACTCTGAAGAGTCTTCCGGGGACGCCGAGAGAGTTCAATTATGTCGAATTGAAGAAGGCGACGAACAATTTCGACGAGAAGCATAAGCTTGGACAAGGCGGTTATGGCGTTGTTTACCGAGGAATGTTGCCGAAGGAGAAGCTGGAAGTCGCGGTGAAGATGTTTTCCAGGGATAAGATGAAGAGTACTGATGATTTCTTGTCTGAACTCATCATCATCAATCGTCTCCGGCATAAGCATTTAGTCCGGTTACAAGGGTGGTGTCACAAAAATGGTGTATTGCTCTTAGTGTACGATTACATGCCCAATGGAAGCTTGGACAGCCACATTTTCTGTGAGGAAGGAGGGACCATCACGACCCCGCTAAGCTGGCCCTTAAGGTACAAGATCATATCAGGGGTGGCTTCTGCATTAAACTACCTGCACAATGAGTATGATCAGAAAGTGGTCCACAGGGACCTCAAGGCCAGCAACATCATGCTGGATTCCGAATTCAACGCAAAATTAGGCGACTTCGGCTTGGCCCGAGCACTCGAGAATGAGAAAATCTCATACACAGAGCTCGAAGGTGTGCACGGCACCATGGGATACATTGCGCCTGAGTGCTTCCACACAGGAAAAGCAACAAGGGAGTCAGACGTTTATGGCTTCGGAGCTGTGCTCTTAGAAGTAGCATGTGGTCAGAGGCCATGGACAAAGATTGAAGGGTACCAGTTTCTGGTGGATTGGGTGTGGCACTTGCACCGCGAAGGAAGGATATTGGAGGCGGTGGATCCAAGACTTGGGGATGAGTATGATGCGGAAGAGGCAGAGAGGATATTGAAATTAGGGCTAGCATGCTCTCATCCTATGGCTGGTGATAGACCTCAAATGCAAGCAATTGTTCAGATCTTATCTGGGTCAGTGCCTGTGCCTCATGTCCCTCCATTCAAGCCATCTTTTGTGTGGCCTGCTGTGGATCTTGCGAGCCTTGCAAGTACCTTTACTACAATGACTACTGAGTACACACCTATGAAAGGTGACACACAATCTTCTTCAGGGCATGTTGAGTACTTTGGCGACAGCTCTCCAGTCTAA 2094 0.5129 MFLLLLFPTLKRLSRRNFLTAAAAVILLLFSAASSAAPLTHVLGPFNLTNFNLFNVVSNATVNQGALQITPDTAGSNSVVSLPNNSGRVLLKEPFTLWEDGKNGKLASFNTSFLINIFRVNNATPGEGLAFLIAPDTTIPANSYGRYLGLTNASTDGNSSNRFIAVELDTVKQRFDPDDNHLGLDINSVVSNITVPLTPLGFQIAPNGTQFFVVWIQYDGGRRRIEVYMAEQPSPDVPVVAKPSKPLLNSTLDLKAIVNQKSYFGFSASTGVTIELNCVLRWNVSIDDFKKSDGGNGLKIGLGVGLGLGFVIVAVIGGLLWWIRLKKKREEGSNSQILGTLKSLPGTPREFNYVELKKATNNFDEKHKLGQGGYGVVYRGMLPKEKLEVAVKMFSRDKMKSTDDFLSELIIINRLRHKHLVRLQGWCHKNGVLLLVYDYMPNGSLDSHIFCEEGGTITTPLSWPLRYKIISGVASALNYLHNEYDQKVVHRDLKASNIMLDSEFNAKLGDFGLARALENEKISYTELEGVHGTMGYIAPECFHTGKATRESDVYGFGAVLLEVACGQRPWTKIEGYQFLVDWVWHLHREGRILEAVDPRLGDEYDAEEAERILKLGLACSHPMAGDRPQMQAIVQILSGSVPVPHVPPFKPSFVWPAVDLASLASTFTTMTTEYTPMKGDTQSSSGHVEYFGDSSPV* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0663 697 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Lja2g0663 697 CDD STKc_IRAK 369 637 - -
Lja2g0663 697 PANTHER - 31 679 - -
Lja2g0663 697 Gene3D Transferase(Phosphotransferase) domain 1 440 642 - -
Lja2g0663 697 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Lja2g0663 697 CDD lectin_legume_LecRK_Arcelin_ConA 46 287 IPR001220 GO:0030246
Lja2g0663 697 Pfam Legume lectin domain 46 291 IPR001220 GO:0030246
Lja2g0663 697 ProSiteProfiles Protein kinase domain profile. 363 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0663 697 Gene3D - 45 294 - -
Lja2g0663 697 ProSiteProfiles Twin arginine translocation (Tat) signal profile. 1 42 IPR006311 -
Lja2g0663 697 Pfam Protein kinase domain 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0663 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 287 IPR013320 -
Lja2g0663 697 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Lja2g0663 697 MobiDBLite consensus disorder prediction 678 697 - -
Lja2g0663 697 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 31 679 - -
Lja2g0663 697 SUPERFAMILY Protein kinase-like (PK-like) 345 662 IPR011009 -
Lja2g0663 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Lja2g0663 697 SMART serkin_6 363 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0663 Lja-Chr2 6017352 6021450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0663 85 653 Receptor kinase-like Gene Family AT5G55830 39.280 1.15e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja2g0663 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0663 - - gmx:100784558 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0663 2 6017352 6021450 Lja2g0663 2 6017352 6021450 ECH