Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0661 ATGATACTAGTAAGAACCAGTGGCTTCTTTTATCTGTTTTTTGCAGTTCTTGTTGCAAAAACTAGCTTTTGCTTATATGATACTACTAAGGTCTATGTTGTGTACATGGGAAGCAAAAATGGCGTAGAGCCGGAGGATGTTCTGAAACATAACCATCAAATGCTTGCATCTGTTCATAGTGGAAGTGTTGAGCAGGCCCAAGCATCTCATATTTATAGCTATAAACATGGTTTTAGAGGCTTTGCAGCCAAGTTGACTGATGGACAGGCTTACCAAATTTCAAAAATGCCTGGGGTGGTTTCTGTTTTTCCCAATTCTAGAAGAAAGTTGCACACCACTCATTCATGGGATTTCATGGGACTTCTGGATGATGAAACCATGGAGGGTACAGGGCACTCTGTCAAAAACCAAACAAATATCATCGTTGGTTTCATTGATACTGGAATTTGGCCTGAATCCCCAAGCTTTAGGGACACTGACATGCCACCCGTACCGCACGGATGGAAAGGCCATTGTCAAGTGGGAGAAGCATTCAATGCTTCATCTTGCAACAGGAAAGTGATAGGAGCTAGATACTACATAAGTGGATATGAAGCAGAAGAAGGGTCAAGCAGCAAAGTCTCTTTCAGATCACCAAGGGATAGCTCTGGTCATGGGAGCCAAACAGCTTCCACAGCAGCGGGGCGCTATGTGGCGAACACGAATTACAAGGGGCTTGCAGAAGGAGGAGCTAGAGGAGGTGCACCTATGGCTAGGATTGCTGTGTACAAAACATGTTGGGATTCTGGTTGCTATGATGTGGACTTGTTAGCTGCTTTTGATGATGCCATACGAGACGGGGTTCACATTATATCTTTATCTCTGGGTCCTGAAGCCCCCCAAGGTGAGTATTTCAACGATGCCATATCTGTGGGGTCCTTCCATGCTGCTAGGCATGGAGTCCTGGTGGTAGCATCAGTTGGAAATGAAGGAACTCCTGGTTCTGCTACGAATCTCGCACCGTGGATGATCACTGTTGCTGCTAGCTCAACAGATAGGGATTTCACCTCTGATATCATGCTAGGAAATGGTGCCAGACTCACGGGTCACAGTCTCAGTATCTTGGAAATGAATGCTTCCAGAAGAATAATTCCAGCATCTGAAGCCTTTGCAGGATATTTTACTCCTTATCAATCCAGTTTCTGTTTGGATAGCTCCCTAAATAAGACCAAAACCAAGGGGAAGGTTCTGGTGTGTCGACGTGCAGAGAGTTCAACTGAATCAAAGTTGGAGAAGAGTAGGGTAGTGAAAGAGGCAGGTGGAGTTGGGATGATTCTTATTGATGAGATGGATCAAGATGTTGCAATCCCATTTGTGATACCTTCAGCTGTTGTTGGAAGGAAAAGAGGAGAACAAATTCTCTCTTATATCAATCGCACAAGGATGCCAATGTCAAGGATATTCAGAGCTAAGACAATCCTAGGAGTTCAGCCTGCACCCCGTGCAGCAGCATTTTCTTCTAAAGGTCCCAATGCCTTAACCCCAGAAATCTTGAAGCCTGATGTTACAGCCCCCGGATTAAACATCCTCGCAGCATGGTCACCAGCAGCAGCTGGAAACATGAAGTTCAATATTCTATCAGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCTACCTTAGTCAAAGCTGTGCATCCTTCATGGTCCCCATCTGCTATCAAATCTGCCATCATGACCACTGCAACAACTCTGGATAAGCAACACAAACCCATTAGAGCGGATCCTGATAACAAAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCCGCAAGAGTTCTGGATCCTGGTCTCGTCTATGATTCACAGCCAAGAGATTTTGTTGAGTTCCTCTGTTCACTTGGTTATGATGAGAAGACACTCCATCTTGTCACCGGAGACAACAGCACATGTCATGGGGCATTCAAAACACCATCTGAACTCAACTATCCATCTATTGTAGTGCCAAATCTTGAAGATAACTTTTCAGTAACTCGAGTTGTGACTAATGTTGGAAAAGCAAGAAGTATATATGAAGCTGTAGTGGTGTCACCTGCAGGAGTTAATGTCACTGTTGTACCAAACAGGTTAGTCTTCACAAGAATAGGACAGAAAATCAAGTTCACTGTGAATTTTAAAGTGGCTGCTCCTTCAAAGGGCTATGGATTTGGGTTCTTGTCATGGAGGAACAGAAGATCACAGGTCACCAGCCCTTTAGTTGTCAAGATTGCATCACCGAAGCTTGGGTTGGTCAGATAA 2289 0.4439 MILVRTSGFFYLFFAVLVAKTSFCLYDTTKVYVVYMGSKNGVEPEDVLKHNHQMLASVHSGSVEQAQASHIYSYKHGFRGFAAKLTDGQAYQISKMPGVVSVFPNSRRKLHTTHSWDFMGLLDDETMEGTGHSVKNQTNIIVGFIDTGIWPESPSFRDTDMPPVPHGWKGHCQVGEAFNASSCNRKVIGARYYISGYEAEEGSSSKVSFRSPRDSSGHGSQTASTAAGRYVANTNYKGLAEGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPEAPQGEYFNDAISVGSFHAARHGVLVVASVGNEGTPGSATNLAPWMITVAASSTDRDFTSDIMLGNGARLTGHSLSILEMNASRRIIPASEAFAGYFTPYQSSFCLDSSLNKTKTKGKVLVCRRAESSTESKLEKSRVVKEAGGVGMILIDEMDQDVAIPFVIPSAVVGRKRGEQILSYINRTRMPMSRIFRAKTILGVQPAPRAAAFSSKGPNALTPEILKPDVTAPGLNILAAWSPAAAGNMKFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATTLDKQHKPIRADPDNKRANAFDYGSGFVNPARVLDPGLVYDSQPRDFVEFLCSLGYDEKTLHLVTGDNSTCHGAFKTPSELNYPSIVVPNLEDNFSVTRVVTNVGKARSIYEAVVVSPAGVNVTVVPNRLVFTRIGQKIKFTVNFKVAAPSKGYGFGFLSWRNRRSQVTSPLVVKIASPKLGLVR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0661 762 ProSiteProfiles Serine proteases, subtilase domain profile. 115 611 - -
Lja2g0661 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 111 IPR037045 -
Lja2g0661 762 Pfam Fibronectin type-III domain 657 751 IPR041469 -
Lja2g0661 762 MobiDBLite consensus disorder prediction 204 224 - -
Lja2g0661 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Lja2g0661 762 Gene3D - 628 754 - -
Lja2g0661 762 CDD PA_subtilisin_like 354 480 - -
Lja2g0661 762 Gene3D - 345 487 - -
Lja2g0661 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 755 IPR045051 -
Lja2g0661 762 Gene3D Peptidase S8/S53 domain 139 624 IPR036852 GO:0004252|GO:0006508
Lja2g0661 762 Pfam PA domain 383 466 IPR003137 -
Lja2g0661 762 CDD Peptidases_S8_3 109 577 IPR034197 -
Lja2g0661 762 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Lja2g0661 762 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Lja2g0661 762 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Lja2g0661 762 Pfam Subtilase family 139 583 IPR000209 GO:0006508|GO:0008236
Lja2g0661 762 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
Lja2g0661 762 SUPERFAMILY Subtilisin-like 30 712 IPR036852 GO:0004252|GO:0006508
Lja2g0661 762 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0661 Lja-Chr2 6006362 6011173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0661 32 753 Subtilisin-like Serine Gene Family AT2G04160 43.333 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0661 - - gmx:100780538 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0661 2 6006362 6011173 Lja2g0661 2 6006362 6011173 ECH