Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0645 ATGAGGTTTCACGTTTCAATTCCTCCGCCGCCATCGCTAATCCTTCTCTTCTTCTTCTTCATCATCATCAGCTGCAACTCCTCCCTATCCTCTTTGCAATCCCAACTCGTGCCCCTCCACGCCGCAAAACCCTTCTCCGGCTCTCTTCCACCGCCGAAACCTGCTGCTGCTGCTACTGCACTCATTGCTGGCCTTGATGGAACTGTTTATCTGGTCGACAGTACTTCTGGGAGAGTCATTTGGTCTTTCTCAACTGGATCCGATATCTACCATTCTGCCAACCAACAACCCCTCAATGACAACATCAACAATGCTTCTCGGTCCGGCCTCATCGAATGCGGAGATGACTGGGAATTGATCATTCACGACACCCACTTCGGTAAAACGAGACTCCCAGAATCTGTTGCTGAATATGTTGCTTTTACACCTATTATGTCAGACGATGGAGCGGTTATACTTGGATCCAAAAAGAGCACCGTGTTTGAAGTGGATGCTAGAACTGGAAGGCTACTTTGGAGCTATGGTGCTGCTGATTTTGATAATGTTTCTGCTACTGCAATGTGGAGTGCTAACTGGCAGGGTGTTAGGAATGACCTTAGAACAAAGAATAATGAGCTTGCTGATCCTGCACAGCTGAATTCACCAGAGTTCTTGCTTAAGATAGTGAGGACTGAATATTTTTTAAAATCTATTGATGGGTCAGGAATGGTTTTGTGGACTATGGCAGTGGCCGAGTTTAAGGCTTTATTACTTTGCCGCCATAAGGAAAATCCTACTGTGAAGGCTTCATTTGATACAAATGATGAGTGTGCTTCAGACAGTGACAGTGGATTGGATTTTGCCATGCCATACACATGTCAAGATAGAAAAATGAAAGAGGTCTACCGCATGCGAAAGAATTTTTTGTTTGAACCTACTGACATAGAAAGATTATCTAGTGCTTATCAGGAGAATGGTATGCTCCCAATGCCTACTTCAAATCTGATGCTTCCATCACAACCTAATGTTGATAGATTCCTCCCTTTTCATGGTGGCAATATGATGCTTCCTGCACCCGTGCCAAATTCCTTACCCTATTTGCAGCCAAAAATCAGGTCAGGTGATAATAATGATAATGTAGCTATGCTCCCTCAGCCTCATATGGAGATCACTCCACCAAGGGAAGTTGATGTAAATAAATGGTTAAGGGCAATAGTCTTTCCCCTAGGTATTATGATCTTGGTTGTAGTGACCATAAAACAAGTTACCTCAAAGGACCGAGTCAGTGGGTCAGATTTTAAAAGCTTACCTTCAAAGAAAAAGAGAGCGCGAAAGTCAGGAAAAAACAATATCATTGTTGACAAACAGGGTAAGCACCTGCCATCAGTTGAGGAGGAGATACTGACAAATAAAGAAACTCAAAGTGAAGCATGGTTGCATTTTGATAACCTTGATAGGCGCAAGGTGGGTAAACTATTTCTTTCGAATAAAGAAATTGCTAAAGGGAGTAATGGTACAATTGTTCTTGAGGGGACATATGAAGGTCGGGAAGTTGCTGTCAAGCGTCTTGTCAAGGCTCATCATGATGTAGCTCGTAAAGAAATCCAAAATCTCATTGCATCTGATTTTCATCCAAACATTGTCCGTTGGTATGGGGTTGAATATGATCCTGATTTTGTTTACCTTGCTCTGGAGCGTTGTACCTGCAACTTGGATGATTTGATTCATTATTATTCGGATATATCAGAAAACCCAGTGTTTAGCAAGGACCATGCTTCTGAATTTTTAAAGAAGGCCCAGATGGAGATAGTGACGGATGATATGCAATGTATGTGGAAAGAAAATAGTTATCCATCTCCTCTATTACTTAAACTGATGAGGGATATCGTTTCTGGGCTTGTTCATCTGCATGAGCTAGGAATAATACATCGGGATTTGAAACCTCAAAATGTTTTGATAACCAAGGAAAGAATGTTATGTGCCAAGCTTTCTGATATGGGGATTAGCAAACGGCTTCTTGAAGATATGTCTTCTTTGGGTCATAGTACTACTGGATGTGGCAGTTCAGGTTGGCAAGCACCAGAGCAACTTATTCAAGGACGCCAAACTCGGGCTGTAGATTTATTTAGTTTAGGTTGTGTCCTTTTTTTCTGTATGACCGCAGGTAGACACCCATTTGGAGAACGTCTTGAGCGTGATGTCAATATTGTGAAAAATAAAAAAGATCTTTTCTTAGTGGAGTTCATGCCTGAAGCTGAAGATCTTATTTCTTGTTTATTAAACCCCGACCCTGATCTAAGGCCAAAAGCAATTGAAGTACTGCACCATCCTCTATTTTGGAGTTCTGAGATGAGACTTTCATTTCTTCGTGAGGCCAGTGACAGGGTGGAACTCGAAGATAGAGACGCCACCTCTGATCTTTTGAATGCCTTAGAAAGCACTGCTCCAGTGGCTTTAGGTGCAAAATGGGATGAAAAGATGGAACCAGCTTTCATTACAAACATTGGTCGTTACAGGCGATATAAATTTGACAGTGTTCGAGACTTGTTGAGGGTCCTGAGAAACAAACTTAATCATTATAGAGAACTGCCTCAAGAAATACAGGAGCTGCTTGGACCTGTTCCAGAAGGATTTAATGACTACTTTGCAAGTCGATTCCCGAGGCTCTTGATTGAAGTGTACAAGGTTATCTGCCAATATTGCAAAGATGATGAATGTTTTCAAAGATATTTTAGAGGCGATTAG 2724 0.4192 MRFHVSIPPPPSLILLFFFFIIISCNSSLSSLQSQLVPLHAAKPFSGSLPPPKPAAAATALIAGLDGTVYLVDSTSGRVIWSFSTGSDIYHSANQQPLNDNINNASRSGLIECGDDWELIIHDTHFGKTRLPESVAEYVAFTPIMSDDGAVILGSKKSTVFEVDARTGRLLWSYGAADFDNVSATAMWSANWQGVRNDLRTKNNELADPAQLNSPEFLLKIVRTEYFLKSIDGSGMVLWTMAVAEFKALLLCRHKENPTVKASFDTNDECASDSDSGLDFAMPYTCQDRKMKEVYRMRKNFLFEPTDIERLSSAYQENGMLPMPTSNLMLPSQPNVDRFLPFHGGNMMLPAPVPNSLPYLQPKIRSGDNNDNVAMLPQPHMEITPPREVDVNKWLRAIVFPLGIMILVVVTIKQVTSKDRVSGSDFKSLPSKKKRARKSGKNNIIVDKQGKHLPSVEEEILTNKETQSEAWLHFDNLDRRKVGKLFLSNKEIAKGSNGTIVLEGTYEGREVAVKRLVKAHHDVARKEIQNLIASDFHPNIVRWYGVEYDPDFVYLALERCTCNLDDLIHYYSDISENPVFSKDHASEFLKKAQMEIVTDDMQCMWKENSYPSPLLLKLMRDIVSGLVHLHELGIIHRDLKPQNVLITKERMLCAKLSDMGISKRLLEDMSSLGHSTTGCGSSGWQAPEQLIQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNKKDLFLVEFMPEAEDLISCLLNPDPDLRPKAIEVLHHPLFWSSEMRLSFLREASDRVELEDRDATSDLLNALESTAPVALGAKWDEKMEPAFITNIGRYRRYKFDSVRDLLRVLRNKLNHYRELPQEIQELLGPVPEGFNDYFASRFPRLLIEVYKVICQYCKDDECFQRYFRGD* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0645 907 SMART PGNneu 837 891 - -
Lja2g0645 907 CDD RNase_Ire1 776 904 - -
Lja2g0645 907 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 62 178 IPR011047 -
Lja2g0645 907 Pfam Ribonuclease 2-5A 778 904 IPR010513 GO:0004540|GO:0006397
Lja2g0645 907 Gene3D KEN domain 775 907 IPR038357 -
Lja2g0645 907 SUPERFAMILY Protein kinase-like (PK-like) 472 796 IPR011009 -
Lja2g0645 907 Pfam PQQ enzyme repeat 149 181 IPR002372 -
Lja2g0645 907 Pfam PQQ enzyme repeat 63 89 IPR002372 -
Lja2g0645 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lja2g0645 907 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 40 904 - -
Lja2g0645 907 SMART ire1_9 143 175 IPR018391 -
Lja2g0645 907 SMART ire1_9 54 84 IPR018391 -
Lja2g0645 907 PANTHER IRE1-RELATED 40 904 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lja2g0645 907 Gene3D Phosphorylase Kinase; domain 1 474 558 - -
Lja2g0645 907 Gene3D Transferase(Phosphotransferase) domain 1 593 774 - -
Lja2g0645 907 Gene3D - 40 198 IPR015943 GO:0005515
Lja2g0645 907 ProSiteProfiles KEN domain profile. 775 906 IPR010513 GO:0004540|GO:0006397
Lja2g0645 907 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lja2g0645 907 ProSiteProfiles Protein kinase domain profile. 486 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0645 907 MobiDBLite consensus disorder prediction 421 441 - -
Lja2g0645 907 Pfam Protein kinase domain 489 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0645 907 SMART serkin_6 486 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0645 Lja-Chr2 5775227 5786329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0645 512 771 MAP Kinase Kinase Kinase AT3G06030 26.136 7.19e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lja2g0645 Pkinase 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0645 K08852 - gmx:100785363 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0645 2 5775227 5786329 Lja2g0645 2 5775227 5786329 ECH