Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0635 ATGGGGGGCTTATTACACATTTTTGAATTCAATCAGGGGAAAATGGCCAAGAAAGTTCGTACTCATCGGAAAAATCCAGGTGGCCTGGAAGCTCCTCGAAATAGTGTAGATCTGCAAGTAGAAACGTCTAAGAGTCACCGTCCAGAAGGGGAATTACCATACTATTGTCAAGTAGAAGAAGACTGGTCTGAGAATAGTCGTTATTCAAATGCAGGTTCAATGAAAAAACTAATCAATGAAGAGCTATCCAAACAATCAAGCAACAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGAAATGATGCCATTAGACAGCAAATCTGTTGCTAAATCAGATAAAAGAATAAATGAAAATATGGGGAAAAAGTTTTCAAACAAGGGAATGAGTGAAAGAGGTTCAGTTAGTTGGGAATCTTCTAACTTCAATTCTTCGAGCCAGATGGAATTTAGTTCATTTTATGAAAATACGGATGGTGATGGTGATGGATGGAGCCGGAGTTTTGGAGAACCAAGGCCACGGGAACATCTTCAGGAAGAGGAACTCCAGAAATTCAAGAAAGAGTTCGAAGCATATCAAGCAGCAAGGTTTCTGGAATGTTCAGAGTTTGCTGAAATTGGCAGTGTTTCTAGACAATTGCTTGTTCAAGAGAACCCAAACAAGGTAAAGGTGGCACATAATTCAAGTTTACAGAGAGCAGCAACATGGAATCTTTCAGAGCTTGATAGTTACTCATTAAAAAAAGAGCTACCTGACAGTGTAGGTTCAGAATATCATGGTGATATGGTGAAGTTAATCTCTTCTATGCAAAGGAAAGCCTTTCCTTCAAAGAGCAGAACTCTAAGTAGAGACTTTGAGGAGTCCCTAATGAAGAAATCGTATAATCGATTAGACACATCTTCTTCTCCCCCTCGGATAGTTATCTTAAAGCCTGGTCTAGATAGCATTTGCAGCCACGAAGAGAGCTGGACCAGTTCATCAAGCGATTTTCAAGGGAAAAATAGTATAGAAGATTTTCTTGAGGAAGTGAAAGAGCGTTTGAAATATGAACTGCAAGGAAAAACTGCCAAAAAGGATTATGTGGTTCGGGGAAGTGAAATTGAGACACTTCACAATAAAAAACAATCTGATCCTAAACTTATAGCCCGTCAGATAGTAAAGCAAGCCAGAGAAAATGTGACTAGAGATGCTGACTCAAATTTGGTCCGCTCGGAATCAACAAGGTCATACAAAAGTGAAATGCAGATCGATGGACAGAGTTTCCCTGAATTTATTAGTAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGAAATGTTGTGAAAAGTGAAATATATGATGACATTTCCAAGGGGAACTCAAGATCATATGCATTAGACAATCACAAAGTTAGACTCAAGCAGACCGGGGACATGATGAAATGTGCCAATGAAAGGGAAATTTCAAAAGAGGAAACACAAATGAAAACAGGATCTTTCAGGCATGAACTAGATGACAATATATTGCTCCATAGGGAGTTGTCCCCTCGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAAGATCAGGAACATCATTCGGGAAGCTTCTTCTAGAGGACCGGCACATTCTATCCGGTGGCCATATTCGAAGGAAGCTTGAAGCTGTTGAAACTATGTCTGCTGATGTTAAAAAACGGAAAAAAGACAGATTTAATATTAAAGAAAGGGTCTCCAATTTAAGATACAGTCTTGCTCTAAGAGGGAAGCTTTTTGGCAAAAGGATTCAATCAATGGTAGAACCACATGGCAATGAATATTGTCCCTTGGTGAGAGATGTCACGAGTGGACCAACAGTTCTTATGAACTGTGGTGAGAGGCATGAAAACTCCACTGAGGTACCTCCTAGTCCTGCGTCTGTGTGCAGCAGTGTTCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCTATATCAACTCCTGATGTGTTTTCAAGAGATGATATTGCTGGGGCCCATGTTTTTAGAGATATCAGCTCAGGTTTGAATGAGCTAAGGAGACAACTCAATCAACTTGAATCTGATGGTCCTGAGGACTTCACCATGAAACAGGAGCCTGATGAGTCTGAATTAGTTCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTCTATTAAGAGGGGACACATTTGGAAAGCCTATTGGCAACTCTGTTTTTGAAGAAGTGGAAGAATCCCAAAAGAATTTGGTCAAGGAGAATGATGAAAGTTCTATAAAGGATCAGAATAAGATAGACCACAGGATTCTGCTTGATTTGCTAAATGAGGCACTGTCAGTTGTTCTCGGACCGACTTTGACGGTGTCTCAATTCAGAAGGAAATTAAGCAACTCTTCCATGTTGCCGCCACCTCGAGGAAAGGAACTGTTGAAGTTAGTATGGAACATTATCGGAGTTTCTGTATATCCTCCATCTGACATTACTCCTTGTTCACTTGACAGTTTGGTTGCTCAACACCTGAGATCCATCCCTTGGTCTGGATTAACAAATGATGAGATCAATGTAGTGGAAAGAGAGATAGAATGTCTAATAATAAATGATCTGGTTGAAGAACTCACAAAGGATATGCTTGAGATTTGA 2676 0.4028 MGGLLHIFEFNQGKMAKKVRTHRKNPGGLEAPRNSVDLQVETSKSHRPEGELPYYCQVEEDWSENSRYSNAGSMKKLINEELSKQSSNRQNAPSLVARLMGIEMMPLDSKSVAKSDKRINENMGKKFSNKGMSERGSVSWESSNFNSSSQMEFSSFYENTDGDGDGWSRSFGEPRPREHLQEEELQKFKKEFEAYQAARFLECSEFAEIGSVSRQLLVQENPNKVKVAHNSSLQRAATWNLSELDSYSLKKELPDSVGSEYHGDMVKLISSMQRKAFPSKSRTLSRDFEESLMKKSYNRLDTSSSPPRIVILKPGLDSICSHEESWTSSSSDFQGKNSIEDFLEEVKERLKYELQGKTAKKDYVVRGSEIETLHNKKQSDPKLIARQIVKQARENVTRDADSNLVRSESTRSYKSEMQIDGQSFPEFISRDTRRFLSERLRNVVKSEIYDDISKGNSRSYALDNHKVRLKQTGDMMKCANEREISKEETQMKTGSFRHELDDNILLHRELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILSGGHIRRKLEAVETMSADVKKRKKDRFNIKERVSNLRYSLALRGKLFGKRIQSMVEPHGNEYCPLVRDVTSGPTVLMNCGERHENSTEVPPSPASVCSSVHEDFWRRTEYLSPISTPDVFSRDDIAGAHVFRDISSGLNELRRQLNQLESDGPEDFTMKQEPDESELVQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFGKPIGNSVFEEVEESQKNLVKENDESSIKDQNKIDHRILLDLLNEALSVVLGPTLTVSQFRRKLSNSSMLPPPRGKELLKLVWNIIGVSVYPPSDITPCSLDSLVAQHLRSIPWSGLTNDEINVVEREIECLIINDLVEELTKDMLEI* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0635 891 Pfam DUF761-associated sequence motif 86 106 IPR032795 -
Lja2g0635 891 MobiDBLite consensus disorder prediction 16 51 - -
Lja2g0635 891 Pfam Domain of unknown function (DUF4378) 717 883 IPR025486 -
Lja2g0635 891 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 889 - -
Lja2g0635 891 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 889 - -
Lja2g0635 891 Coils Coil 672 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0635 Lja-Chr2 5706700 5711453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0635 74 888 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.387 6.71e-144 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0635 - - gmx:100789616 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0635 2 5706700 5711453 Lja2g0635 2 5706700 5711453 ECH