Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0621 ATGAACAGCCCTAGCCCTTCCAAGGATTCCACCACCACCAACACTACACCACCACCCTCTTCCCCTCCTCAACACCCTCCTCTTACCGGTGATGGTGATGATGTTGTTGTTCCTACTCCAACAGAAGTAACCAACCCAACCGGCTCTGAGGAGGGAAAAGCGGAGGAGGCCGCCGGAGAAATGTTGCTGAAAACCGCTGCTCAAGTGCTGGAGGAACTTGCTGGCAGTGATGACAGCGGCAATGGCAACGGCGGTGGTGGTAGCGGTAGCATCCCTCTTGGAAGTGGTGGAGGGGGGGCAGAGGCCGGTGCTGTGGCCGTGGCAGTGGGTGGTAGTGGTGGTGGAACTGTGAAAAGTGATAAGAGAAAGGGTGATGGTGGTGCTGTTGAAGTTGTGGTGAAGGAGAAGGAGACTAAAAAACCTAGACTCACTGAAGTGAAAGACCCTCCCTCAGGGCCACCAACTTGTCCCATTTGCCAAAGACAGTTTCAGACATGGAAGGGCGCATTTGGACACATGCGTTCTCACCCAGATCGTGAATACCGCGGTTTCTTTAGGCCTCCTGTTTTTGGTTCATCTTCTGCCCCAGCCACAGATGCGCCACCACCATCGAATGCTGAAAATGATAACAATAAGGGGGCTGATGTTGGAGAGGCAAGTAAAGGTGATGGTGAGAAGAAGGGTGAGGAGCCTAAACGAGGAATGGTGTTTGATTTGAACAATCCAATGATGGAGGGAGAGGGTTCCTCTAGTGCTGCTGCTGCTGCCCCCGCCGGTGGAAACCAAGCACCTGATGAGGCTATGGTTGAAGAGAGGGTTCAAGAGGAGGGGAGGAACTTGAGAGGGTTTGATTTGAATGAGATGCCCAAGGATGATGATGATGAATGA 888 0.5282 MNSPSPSKDSTTTNTTPPPSSPPQHPPLTGDGDDVVVPTPTEVTNPTGSEEGKAEEAAGEMLLKTAAQVLEELAGSDDSGNGNGGGGSGSIPLGSGGGGAEAGAVAVAVGGSGGGTVKSDKRKGDGGAVEVVVKEKETKKPRLTEVKDPPSGPPTCPICQRQFQTWKGAFGHMRSHPDREYRGFFRPPVFGSSSAPATDAPPPSNAENDNNKGADVGEASKGDGEKKGEEPKRGMVFDLNNPMMEGEGSSSAAAAAPAGGNQAPDEAMVEERVQEEGRNLRGFDLNEMPKDDDDE* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0621 295 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 97 295 - -
Lja2g0621 295 MobiDBLite consensus disorder prediction 118 146 - -
Lja2g0621 295 MobiDBLite consensus disorder prediction 1 158 - -
Lja2g0621 295 MobiDBLite consensus disorder prediction 268 288 - -
Lja2g0621 295 MobiDBLite consensus disorder prediction 1 15 - -
Lja2g0621 295 MobiDBLite consensus disorder prediction 214 234 - -
Lja2g0621 295 ProSitePatterns Zinc finger C2H2 type domain signature. 156 176 IPR013087 -
Lja2g0621 295 MobiDBLite consensus disorder prediction 171 295 - -
Lja2g0621 295 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 97 295 - -
Lja2g0621 295 MobiDBLite consensus disorder prediction 197 211 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0621 156 190 C2H2 Transcription Factor Family AT4G35280 51.429 1.39e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lja2g0621 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0621 - - lja:Lj2g3v1644350.1 171.014