Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0615 ATGGAGAGCCTCCCGACTGATTTGGCAAAGAAAGGTGTGGAGACATTGATAGAGAAGGCAATAGCAGAATTACGCTATTTATGTTGCTACACATGTATTGCTGAAGACTTTGAAAAAGAAAAGAAAAAGCTGGTAGCAGAAAGGAAGAGTTTGGAGCAACGTATTGAAGTGGCAAAGGGAAGAGGAGAAGTTATTCAAGACAATTCATATTTTTGGGAAGATCAAGCTGATGAAATCATTAGAGGGGACAACAAAATAGAACAAACGTGTTTTCCTAATTGCATAAGACGATATAGAAAGGGGAGAGAACTTTCAAGTAAAATGGGGGAGATAAAAGAACTGTTGGATTGGGGAAGGACACTTGAAAATGTTGGACTCCCTCCTCGTCTTCCAGGCGTAGAACGCTATTCTTCCCGAGATTACATTCATTTCAAAAGCAGAGATTCCAAATACAATGAACTTTTGAATGCACTCAAAGATGATAACAACTATATAACAGGATTGCATGGGATGGGGGGCACCGGAAAAACTACATTAGCAAAACAAGTGGGCAAGGAACTCATCCAATCAAAACAATTCAAACATGTCATTGATACTACCGTGTCATCTTCTCCCGATATGAAAAAAATTCAAGATGATATTGCAGCACCCTTAGGATTGTCACTGAAGGATTGTAATGAATCAGAAAGACGTGGAAAACTGTGGAGCAGATTAACCAATGGTGATAAAATTCTTCTGATATTGGATGATGTGTGGGACTGGCGACATATCAAGTTTGAAGAAATAGGGATGCCATCCGTGGACAATCACAAAGGTTGCAGAGTTCTTATAACCACACGTGATCGACGAGTATGCACCTCAATAGGATGCGAGAGGATAATTCAACTAGATTTATTATCTCAAGAAGAATCGTGGATCATGTTCAAAAGGTATGTTAATATAACTGATAGTTTTTCTTCAACTTTGCTCAGTAAGGGACGTGAAATAGCAAAAGAATGCAAAGGATTACCAGTTGCGATTTCAATTGTCGCTGGCAGTTTAAAGGGACAACAACATCAGGAAGAGTGGAACTTAGCCTTAAAATCCTTGCGGGAGCCTCTTAAATCCATCTTCGATAATCTAAAGGATGAAAAAGCCAAGAAACTATTCCTCTTATTTTCTGTATTCCCAGAAGACACTGAAGTTCCTAATGAACTTTTGACAAGATTGGGGATTGGAGCGGGAATTTTCGGGGAACTTGGTGACAAATATGATGATGCTCGAAACCAGTTAATTGTAGCACGAAATAGACTCGTAGATTCTTGTTTATTGAATGCTGGTGATAGGTTTCTTAAAATGCATGACTTGGTTCGTGAAGTGGCTCTATGGATGACCAACAATGAGATTCAAGAAGTAAATATACCTAACAAAAATCAAAAGTTGTTTGTTCAAAGGGAAAATAACATTAAATATTTATCATGCAAAGTCAATGACCAAGATATCTTTTCTTGTGGGATTGATGGCTCCAAACTTGAGATTCTAAATATCTTCATAAACACTAATGCATTTGCTTATGTGCAATTCCCAAGTTTGTTCTTCAAAAATATGAAGAGCCTTCGAGTTTTGCATATTGATATTAATGGATGGCAATATCCATCATTATCGTTAGCACATTCAATTGGATCCTTGATGAATATTCGATCTCTATTCATTAGGAAGTTCGATTTAACTGATATTTCTGCTTTGGGAAACCTACTGAGTCTTGAGACTCTTGATTTATTTTATTGCCGCTTCTCTGAATTACCAGTTGAAATTGTGAAACTGGATAAACTTAGAGTGTTGAGGTTAAAGAGTTGTAGTTGTGAATTTCCATTCAAAGTGATTGAAAGATGCTCAACACTAGAAGAATTGTATATCGATGATATGATGTACTTTACAGGTGACATTACTGAAGTTCATCAACTAGGAATCCCATTGCAAAGGTACTTTTTATCTAGTCAAGATTCGATAGATGATATGGATGCTTCGCTGCCTAAACGAGTGCGTCTTCTAAACAATATACCTACATTTGCTGGTGACTCACAAGAGTACATAGATGGTTCTCTATCAAAACGATTGTGTCTTTTGAACATTAATCTTCACTTTTTCTCAGAAAATACAATCAAGTATTTTGCAAAAACGACAGAGGATCTACAATTAGATGGAAATATGCTAAAATGGAGAAATCTAATGCCTGAAATTATTCCAATAGAAGGTAACCATGATCTAGTTGTGCTTTATATGAATTATTTTTTACAACTAGAGTGTCTCATTGACACTACGAGTATTGATGCTCAAGTACTAAATGTCTTGCCTAAGTTGGTTGAACTAGCACTTGAAGAAATGGATAATTTGAAAGAATTGTGCAATGGTCCATTTCCCTCTGACTTTTTGCAGCGTTTAGAGTGGTTGTTTATACGTAAATGTGCTCAACTACTAGAAAAAATCCACATATCAGATTGTGAAGAGCTGAAGTATATATTTGGCCAGTGCCAGCATGAACATAAATGCAAGAGTTTACATCAAGAAGTGAAGGATGGTGTACTTGGTTCACTGAAAAGCATACAACTCATAAAGTTGCCAAATTTCATAGACATTTTCCCAGTATGTGATAATCCTCCCGTGAAGAGGTCATCTACCAGAGATATTTCCACGTCACAAATACAACCAAAGCCCATCAAATGCAATATCTTTCCTTGGAAGTATAGCCATAAACCAAGGATCGCCACAAGAACGGAAATCTCATTGGATTCTGAGGATAAACCACAAGACTGCTCAATCTCATTGGGATCAAGCTTGTACGATTTTCACCTTTGGCAACATGCTCAACCTCTATTTAGACATTCACAAAATTTGTGCAATATCACAGAAATTAATGTATGCAATGTTTCGAAGATAAAATCGATATTTATCGTGTCTATTGCTCGAGCAATGTTGTTGGAAAAATTGAGCATCAAGGAATGTGATGAGTTGAAGCACATAATAATAGGCATTGATGATTGTGGTGATGTCTTCCCAAAACTCAAAGATCTCGAAGATTGGAGAGAGTACGAGAAGCATTTTCTCACTTTGGAATTTCTCAGGGTACTTGAGACGGTGACGGGGCCATTCCGAAACGCCATCGTTTTCTCATCTCCTTCTCCTGCGCGGCGGCGTGAGATCCATTCCGTCACCGGAGATCTCACCTCCACCGGCTCTTCCCGCCTTCAAATCGAACAACCGTTGCCTCCTCCTCCTTCATTCTATACCACAAGCTTATGCTGGTAA 3285 0.3793 MESLPTDLAKKGVETLIEKAIAELRYLCCYTCIAEDFEKEKKKLVAERKSLEQRIEVAKGRGEVIQDNSYFWEDQADEIIRGDNKIEQTCFPNCIRRYRKGRELSSKMGEIKELLDWGRTLENVGLPPRLPGVERYSSRDYIHFKSRDSKYNELLNALKDDNNYITGLHGMGGTGKTTLAKQVGKELIQSKQFKHVIDTTVSSSPDMKKIQDDIAAPLGLSLKDCNESERRGKLWSRLTNGDKILLILDDVWDWRHIKFEEIGMPSVDNHKGCRVLITTRDRRVCTSIGCERIIQLDLLSQEESWIMFKRYVNITDSFSSTLLSKGREIAKECKGLPVAISIVAGSLKGQQHQEEWNLALKSLREPLKSIFDNLKDEKAKKLFLLFSVFPEDTEVPNELLTRLGIGAGIFGELGDKYDDARNQLIVARNRLVDSCLLNAGDRFLKMHDLVREVALWMTNNEIQEVNIPNKNQKLFVQRENNIKYLSCKVNDQDIFSCGIDGSKLEILNIFINTNAFAYVQFPSLFFKNMKSLRVLHIDINGWQYPSLSLAHSIGSLMNIRSLFIRKFDLTDISALGNLLSLETLDLFYCRFSELPVEIVKLDKLRVLRLKSCSCEFPFKVIERCSTLEELYIDDMMYFTGDITEVHQLGIPLQRYFLSSQDSIDDMDASLPKRVRLLNNIPTFAGDSQEYIDGSLSKRLCLLNINLHFFSENTIKYFAKTTEDLQLDGNMLKWRNLMPEIIPIEGNHDLVVLYMNYFLQLECLIDTTSIDAQVLNVLPKLVELALEEMDNLKELCNGPFPSDFLQRLEWLFIRKCAQLLEKIHISDCEELKYIFGQCQHEHKCKSLHQEVKDGVLGSLKSIQLIKLPNFIDIFPVCDNPPVKRSSTRDISTSQIQPKPIKCNIFPWKYSHKPRIATRTEISLDSEDKPQDCSISLGSSLYDFHLWQHAQPLFRHSQNLCNITEINVCNVSKIKSIFIVSIARAMLLEKLSIKECDELKHIIIGIDDCGDVFPKLKDLEDWREYEKHFLTLEFLRVLETVTGPFRNAIVFSSPSPARRREIHSVTGDLTSTGSSRLQIEQPLPPPPSFYTTSLCW* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0615 1094 Gene3D Ribonuclease Inhibitor 446 867 IPR032675 -
Lja2g0615 1094 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 947 1017 - -
Lja2g0615 1094 Pfam NB-ARC domain 151 371 IPR002182 GO:0043531
Lja2g0615 1094 Gene3D - 298 378 IPR042197 -
Lja2g0615 1094 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 92 875 - -
Lja2g0615 1094 SUPERFAMILY L domain-like 445 823 - -
Lja2g0615 1094 CDD AAA 151 279 - -
Lja2g0615 1094 PANTHER - 92 875 - -
Lja2g0615 1094 PANTHER - 947 1017 - -
Lja2g0615 1094 Coils Coil 34 61 - -
Lja2g0615 1094 PRINTS Disease resistance protein signature 165 180 - -
Lja2g0615 1094 PRINTS Disease resistance protein signature 238 252 - -
Lja2g0615 1094 PRINTS Disease resistance protein signature 333 347 - -
Lja2g0615 1094 PRINTS Disease resistance protein signature 576 592 - -
Lja2g0615 1094 Gene3D - 134 294 IPR027417 -
Lja2g0615 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0615 Lja-Chr2 5514752 5522690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0615 166 636 WRKY Transcription Factor Family AT5G45050 22.490 4.51e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0615 - - lja:Lj2g3v1645540.1 882.093