Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0602 ATGACTGAAAACGGGGAAGAGAAATTACTCGCTATGGCGCGGCACATTGCAAAGTCGCTGAGCAACGATACCAACATGACCGATCAAATCCACCAAATCCTCTCTGACTTTGATGAAAGATTCACGATTGAGAATCTCTCTGAGAAGGATGCAGAACCAGTTACCAGAGCCTGCGCAGCACTGGATCACTCAACCGAGACCCTACGCTACCGGTTCTCTCACTTCGTCGGCTTCTCCACCGACGCCGCCGCCTTCCTTGCCGCTATTGACGACCTCAACGCTGTAGTCGCCGAATGGACCCCCCTCGCCGCTGATGAGTCCGTCGCCGCGTCCCTCATGCACGCCCAGAACATGCTCCAGCGCGCCATGTCCCGCCTTGAAGACGAGTTCCGTTCCCTCATGGAGCGCGGTGCCGAGTCCTTCGACTTCACTCAGCTGGACCGGAATGGCGAGTCAAGGGAAAACCTACCAAAGGAGGAAGAAGAAGAAGAAGAAGAGGACCAGATGAGAAACATAGAAGAAGGAAATCAGCAGACTCCGGTGATCAACTACGACATGGTTATCGACACGCTACCGTCCGAGACGATTGACAACCTCCACGAGATCGCGAAGCGTATGGTGGCCGGAGGGTATGGGAAAGAGTGCTCGTACGTGTACGACAGTTGCCGGAGGAAATTTATGAAAGAGAGCCTGTCGAGGTTAGGATTACGGAAGCTCACCATACAGGACGTTCTCAAGCTGCCATGGAAGGACCTCGAGGACGAGATTGAACGGTGGATCAAGGCCTCCAACGTTGCTCTCACGACACTGTTCCCCAGCGAGCGGAGGCTCTACGACCGCGTCTTCTTGGGGGTCCCCTCCTCGTCCTCCGCTGCAGACCTCTCCTTTATGGAGGTTTGCAGGGAATCCGTTTTCCAGCTGCTGAACTTCGCCGATGCTGTTGCTATGGGAACCCGCTCGCCGAAGCTGCTGTTTAGGGTCCTCGACATGTTCGAGACTATGGATGACTTGATCCCCAAGTTTAAGTCTATGTTCTGTGATGTGTTCCTCAAGGAGGAAGCAAGCATGACTTGGAAGAGATTGGGGAAAGCAATTACGTGGATTTTCATGGAGTTGGAGAATCTGATTCGGGATTCGGCAAAGACGGAGGTTTCCGACGGCGGTGTTCACCCGATTACTTGTGATGTGATGAACTACCTCCGTGCTGCGTGTCGGTCACGAGAGACACTGGAGCATGTGTTTAAGGAATATGGGCATCCCTTGAAGGAATACCCCGAGTTTGATGACAAAGTACCTTCATCTTCCTCCATGCCGGTGCAAGTGAATTTAATTATGGAACTATTGGAGAGCAGTTTGGAAGCTAAGTCCAAGATCTATAAGGACCCTGCTTTGGGCGATGTTTTTCTGATGAACAATGTCAGGTACATAGTCCAGGAGGCCAAAGATGGTGAATTGGGAACGCTTTTGGGGAATGATTGGATCAAGAAACACCATGCCAAAGTAAGGGAATATCATCTAGAGTATCAAAGAAAGTCATTGAACGGGATGTTGGAGATTCTAAAACCTGACAATGAATCAATGCCACCAGGTGTGGTAGCCAAGTCGATGAAAGAGAAGCTCATGTCATTTAACACCTACTTTGAGAATATATGCCGGATTCAATCTTCATGGTTTGTCTTTGATGAACAATTAAGGGAAGAAATAAGTATTTTTCATGAGACTTTTTTGGTGCCTGCGTATAGAAACTTCATTGGGAGGTTTCAGAGTTCAGAACATATTAAGCATGCCGATAAATACATTAAGTATGAAACAGAGAAAATTCAAACAATGCTCAAAGATTTGTTTCAGGGTAACAAGGAGTCAACCGGTAGACGAAAATGA 1881 0.4902 MTENGEEKLLAMARHIAKSLSNDTNMTDQIHQILSDFDERFTIENLSEKDAEPVTRACAALDHSTETLRYRFSHFVGFSTDAAAFLAAIDDLNAVVAEWTPLAADESVAASLMHAQNMLQRAMSRLEDEFRSLMERGAESFDFTQLDRNGESRENLPKEEEEEEEEDQMRNIEEGNQQTPVINYDMVIDTLPSETIDNLHEIAKRMVAGGYGKECSYVYDSCRRKFMKESLSRLGLRKLTIQDVLKLPWKDLEDEIERWIKASNVALTTLFPSERRLYDRVFLGVPSSSSAADLSFMEVCRESVFQLLNFADAVAMGTRSPKLLFRVLDMFETMDDLIPKFKSMFCDVFLKEEASMTWKRLGKAITWIFMELENLIRDSAKTEVSDGGVHPITCDVMNYLRAACRSRETLEHVFKEYGHPLKEYPEFDDKVPSSSSMPVQVNLIMELLESSLEAKSKIYKDPALGDVFLMNNVRYIVQEAKDGELGTLLGNDWIKKHHAKVREYHLEYQRKSLNGMLEILKPDNESMPPGVVAKSMKEKLMSFNTYFENICRIQSSWFVFDEQLREEISIFHETFLVPAYRNFIGRFQSSEHIKHADKYIKYETEKIQTMLKDLFQGNKESTGRRK* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0602 626 Coils Coil 109 136 - -
Lja2g0602 626 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 31 616 - -
Lja2g0602 626 Coils Coil 158 178 - -
Lja2g0602 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 616 IPR004140 GO:0000145|GO:0006887
Lja2g0602 626 SUPERFAMILY Cullin repeat-like 80 615 IPR016159 -
Lja2g0602 626 MobiDBLite consensus disorder prediction 143 176 - -
Lja2g0602 626 Pfam Exo70 exocyst complex subunit 257 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja2g0602 626 Gene3D Exocyst complex component Exo70 73 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0602 Lja-Chr2 5377511 5379391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0602 1 625 EXO70 exocyst subunit family AT5G58430 54.914 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0602 K07195 - gmx:100803694 757.288