Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0598 ATGAAAGCAATGATAGCAACGCCGGTTGTTCTCTCCGCCGCTACCTACCGTTCATGCTCTCCGATCAGGATCAGCTCTTCATTTCTAAAAGCCCCCATCTCTCACAAGCAACGGATAACCATTGCTGTTCAACCAAAGTTTCAAACCTTCCGAGTGGAAGGTGCTATGAATCAAAATTTGGAAGCTGTGGGAGTTGTTCCAACTTCAGTGCCGGTGCGTGTAGCGCACGAGCTTCTTCTAGCTGGGCATAAGTATTTGGATGTGAGAACCCCTGAAGAGTTTGATGCTGGACATGCTCCTGGTGCCATTAACATACCCTACATGTTCAAAGTTGGATCAGGGATGACAAAGAACAGCAACTTTGTTAAAGAGGCCTCCTCACAGTTTAGGAAAGAGGATGAAATTATTGTTGGGTGTCAGCTTGGTAAAAGGTCTATGATGGCTGCTACTGACTTGTTAGCTTCTGGGTTCACTGGAGTCACAGACATAGCTGGCGGTTATGCTGCGTGGACCCAAACTGGACTTCCAACAGAACGGTGA 540 0.4722 MKAMIATPVVLSAATYRSCSPIRISSSFLKAPISHKQRITIAVQPKFQTFRVEGAMNQNLEAVGVVPTSVPVRVAHELLLAGHKYLDVRTPEEFDAGHAPGAINIPYMFKVGSGMTKNSNFVKEASSQFRKEDEIIVGCQLGKRSMMAATDLLASGFTGVTDIAGGYAAWTQTGLPTER* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0598 179 Pfam Rhodanese-like domain 84 172 IPR001763 -
Lja2g0598 179 Gene3D - 47 178 IPR036873 -
Lja2g0598 179 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 15 178 - -
Lja2g0598 179 SMART rhod_4 69 176 IPR001763 -
Lja2g0598 179 ProSiteProfiles Rhodanese domain profile. 79 179 IPR001763 -
Lja2g0598 179 CDD RHOD 86 170 - -
Lja2g0598 179 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 68 178 IPR036873 -
Lja2g0598 179 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 15 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0598 69 176 Sulfurtransferasese or Rhodanese AT5G66170 46.364 2.16e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0598 - - aprc:113868825 249.98