Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0597 ATGGTGATTGAGCATGACATTGAAAGCTGCGGAAGCAGAGCGGTGCAGTCGTCGCATCCAAATCCTCGCCACCACCGCCAGAAACTCGAGGTCTACAATGAGGTTCTTCGTCGAATTCAGGATTCCGATTGCGATGAGGCTCATGTTCCTGGCTTCGATGATCAGCTTTGGCTTCACTTCAATCGACTCCCTGCTAGGTACGCGTTGGATGTCAATGTGGAGAGGGCTGAAGATGTTCTTGCTCACAAGAGATTGCTCAAGTTGGCTGAGGACCCTGCTAATCGCCCGGCATTTCAAGTTCGATTAGTACAGGTATATCCTTTCGCTGGTGCAAATCATAATGATTCCATGCATTTAGATCCTTCTGAGAAAGAAGATGCACAGAGTTCTCTTAACCATTCTTTTAAGCAGGGAATTCATCCACCGCCTACATTTGGTTCATCTTCTAATCTCGAAGCTCTTGCACTTCAAACAACTAAAAATAACATTGAAGATGGAGGCAGTGCTATGGGTGCGGCACAATATTTTCACCGGCCTATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTAAGTCAGTTAACTTCAATTCTTGGGGAGATTGGACTGAATATTCAAGAAGCTCATGCATTTTCCACTTCTGATGGGTTTTCTTTGGATGTCTTTGTCGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTTAAAGGTATATTGGAAAAGGAAATTTTTAAGATAAAGGAGCAATATGTGTCAAATCAGGGCGTACTTTATGCTGCCAATGAACAATGCCAGACAGGGATGGAACCTTCCCCTCATTGTATACAAATACCATGTGATGGAGCTGATGTCTGGGAAATTGATGCCAACCAGCTTAAATATGAAACCAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGCACATATTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAACCTGAACGCATAAGTACAGATATGCTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTAGACACAAGAATGTTGTTCAGTTCATTGGCGCATGTACTCGGACACCGAATCTTTGTATTGTTACTGAATTTATGTCTAGAGGAAGCTTATATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCGATTGATGTCTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACCGGGACCTCAAGACTGGCAACCTTCTGATGGATGAAAATGAATTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGATAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCCGATGTATTCAGTTTTGGAATAGCTCTTTGGGAACTCTTAACCGGAGAGTTGCCTTACTCGTACTTGACTCCATTACAAGCAGCAGTTGGCGTGGTGCAGAAGGGTCTACGGCCATCGATTCCCAAAAACACACATCCAAGACTTTCTGAACTGCTCCAACGGTGTTGGAAACAAGATCCAATTGAGAGACCAGCTTTCTCCGAAATAATTGAAATTCTTCAGAACATAGCAAAAGAGGTCAACGATACAAAAACAGATCGACACAAAGACAAATCATCCCATCATGGCTTTCTATCAACACTTAAACGTGCCCATAACTGA 1734 0.4302 MVIEHDIESCGSRAVQSSHPNPRHHRQKLEVYNEVLRRIQDSDCDEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPANRPAFQVRLVQVYPFAGANHNDSMHLDPSEKEDAQSSLNHSFKQGIHPPPTFGSSSNLEALALQTTKNNIEDGGSAMGAAQYFHRPMHEITFSTVDKPKLLSQLTSILGEIGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGILEKEIFKIKEQYVSNQGVLYAANEQCQTGMEPSPHCIQIPCDGADVWEIDANQLKYETKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRTPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTGNLLMDENELVKVADFGVARVITQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEIIEILQNIAKEVNDTKTDRHKDKSSHHGFLSTLKRAHN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0597 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Lja2g0597 577 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Lja2g0597 577 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Lja2g0597 577 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Lja2g0597 577 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Lja2g0597 577 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Lja2g0597 577 CDD ACT_TyrKc 180 246 - -
Lja2g0597 577 MobiDBLite consensus disorder prediction 1 25 - -
Lja2g0597 577 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 562 - -
Lja2g0597 577 MobiDBLite consensus disorder prediction 554 568 - -
Lja2g0597 577 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672|GO:0006468
Lja2g0597 577 ProSiteProfiles ACT domain profile. 182 256 IPR002912 -
Lja2g0597 577 MobiDBLite consensus disorder prediction 554 577 - -
Lja2g0597 577 ProSiteProfiles Protein kinase domain profile. 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0597 577 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Lja2g0597 577 CDD STKc_MAP3K-like 301 544 - -
Lja2g0597 577 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Lja2g0597 577 Gene3D Transferase(Phosphotransferase) domain 1 374 575 - -
Lja2g0597 577 SUPERFAMILY Protein kinase-like (PK-like) 275 544 IPR011009 -
Lja2g0597 577 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 15 562 - -
Lja2g0597 577 SMART serkin_6 295 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0597 577 Coils Coil 232 252 - -
Lja2g0597 577 SUPERFAMILY ACT-like 180 246 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0597 Lja-Chr2 5337480 5346012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0597 8 576 MAP Kinase Kinase Kinase AT4G35780 69.877 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lja2g0597 PK_Tyr_Ser-Thr 6.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0597 - - gmx:100816767 1045.03