Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja2g0597 | ATGGTGATTGAGCATGACATTGAAAGCTGCGGAAGCAGAGCGGTGCAGTCGTCGCATCCAAATCCTCGCCACCACCGCCAGAAACTCGAGGTCTACAATGAGGTTCTTCGTCGAATTCAGGATTCCGATTGCGATGAGGCTCATGTTCCTGGCTTCGATGATCAGCTTTGGCTTCACTTCAATCGACTCCCTGCTAGGTACGCGTTGGATGTCAATGTGGAGAGGGCTGAAGATGTTCTTGCTCACAAGAGATTGCTCAAGTTGGCTGAGGACCCTGCTAATCGCCCGGCATTTCAAGTTCGATTAGTACAGGTATATCCTTTCGCTGGTGCAAATCATAATGATTCCATGCATTTAGATCCTTCTGAGAAAGAAGATGCACAGAGTTCTCTTAACCATTCTTTTAAGCAGGGAATTCATCCACCGCCTACATTTGGTTCATCTTCTAATCTCGAAGCTCTTGCACTTCAAACAACTAAAAATAACATTGAAGATGGAGGCAGTGCTATGGGTGCGGCACAATATTTTCACCGGCCTATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTAAGTCAGTTAACTTCAATTCTTGGGGAGATTGGACTGAATATTCAAGAAGCTCATGCATTTTCCACTTCTGATGGGTTTTCTTTGGATGTCTTTGTCGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTTAAAGGTATATTGGAAAAGGAAATTTTTAAGATAAAGGAGCAATATGTGTCAAATCAGGGCGTACTTTATGCTGCCAATGAACAATGCCAGACAGGGATGGAACCTTCCCCTCATTGTATACAAATACCATGTGATGGAGCTGATGTCTGGGAAATTGATGCCAACCAGCTTAAATATGAAACCAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGCACATATTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAACCTGAACGCATAAGTACAGATATGCTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTAGACACAAGAATGTTGTTCAGTTCATTGGCGCATGTACTCGGACACCGAATCTTTGTATTGTTACTGAATTTATGTCTAGAGGAAGCTTATATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCGATTGATGTCTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACCGGGACCTCAAGACTGGCAACCTTCTGATGGATGAAAATGAATTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGATAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCCGATGTATTCAGTTTTGGAATAGCTCTTTGGGAACTCTTAACCGGAGAGTTGCCTTACTCGTACTTGACTCCATTACAAGCAGCAGTTGGCGTGGTGCAGAAGGGTCTACGGCCATCGATTCCCAAAAACACACATCCAAGACTTTCTGAACTGCTCCAACGGTGTTGGAAACAAGATCCAATTGAGAGACCAGCTTTCTCCGAAATAATTGAAATTCTTCAGAACATAGCAAAAGAGGTCAACGATACAAAAACAGATCGACACAAAGACAAATCATCCCATCATGGCTTTCTATCAACACTTAAACGTGCCCATAACTGA | 1734 | 0.4302 | MVIEHDIESCGSRAVQSSHPNPRHHRQKLEVYNEVLRRIQDSDCDEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPANRPAFQVRLVQVYPFAGANHNDSMHLDPSEKEDAQSSLNHSFKQGIHPPPTFGSSSNLEALALQTTKNNIEDGGSAMGAAQYFHRPMHEITFSTVDKPKLLSQLTSILGEIGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGILEKEIFKIKEQYVSNQGVLYAANEQCQTGMEPSPHCIQIPCDGADVWEIDANQLKYETKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRTPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTGNLLMDENELVKVADFGVARVITQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPSIPKNTHPRLSELLQRCWKQDPIERPAFSEIIEILQNIAKEVNDTKTDRHKDKSSHHGFLSTLKRAHN* | 578 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja2g0597 | 577 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 412 | 424 | IPR008271 | GO:0004672|GO:0006468 | |
Lja2g0597 | 577 | PRINTS | Tyrosine kinase catalytic domain signature | 452 | 462 | IPR001245 | GO:0004672|GO:0006468 | |
Lja2g0597 | 577 | PRINTS | Tyrosine kinase catalytic domain signature | 406 | 424 | IPR001245 | GO:0004672|GO:0006468 | |
Lja2g0597 | 577 | PRINTS | Tyrosine kinase catalytic domain signature | 471 | 493 | IPR001245 | GO:0004672|GO:0006468 | |
Lja2g0597 | 577 | PRINTS | Tyrosine kinase catalytic domain signature | 369 | 382 | IPR001245 | GO:0004672|GO:0006468 | |
Lja2g0597 | 577 | PRINTS | Tyrosine kinase catalytic domain signature | 515 | 537 | IPR001245 | GO:0004672|GO:0006468 | |
Lja2g0597 | 577 | CDD | ACT_TyrKc | 180 | 246 | - | - | |
Lja2g0597 | 577 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Lja2g0597 | 577 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 15 | 562 | - | - | |
Lja2g0597 | 577 | MobiDBLite | consensus disorder prediction | 554 | 568 | - | - | |
Lja2g0597 | 577 | Pfam | Protein tyrosine and serine/threonine kinase | 295 | 544 | IPR001245 | GO:0004672|GO:0006468 | |
Lja2g0597 | 577 | ProSiteProfiles | ACT domain profile. | 182 | 256 | IPR002912 | - | |
Lja2g0597 | 577 | MobiDBLite | consensus disorder prediction | 554 | 577 | - | - | |
Lja2g0597 | 577 | ProSiteProfiles | Protein kinase domain profile. | 295 | 569 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja2g0597 | 577 | ProSitePatterns | Protein kinases ATP-binding region signature. | 301 | 322 | IPR017441 | GO:0005524 | |
Lja2g0597 | 577 | CDD | STKc_MAP3K-like | 301 | 544 | - | - | |
Lja2g0597 | 577 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 373 | - | - | |
Lja2g0597 | 577 | Gene3D | Transferase(Phosphotransferase) domain 1 | 374 | 575 | - | - | |
Lja2g0597 | 577 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 544 | IPR011009 | - | |
Lja2g0597 | 577 | PANTHER | ACT-LIKE TYROSINE KINASE FAMILY PROTEIN | 15 | 562 | - | - | |
Lja2g0597 | 577 | SMART | serkin_6 | 295 | 549 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja2g0597 | 577 | Coils | Coil | 232 | 252 | - | - | |
Lja2g0597 | 577 | SUPERFAMILY | ACT-like | 180 | 246 | IPR045865 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja2g0597 | Lja-Chr2 | 5337480 | 5346012 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja2g0597 | 8 | 576 | MAP Kinase Kinase Kinase | AT4G35780 | 69.877 | 0.0 | 808 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Lja2g0597 | PK_Tyr_Ser-Thr | 6.2e-75 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja2g0597 | - | - | gmx:100816767 | 1045.03 |