Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0592 ATGGCGGAACCCGGTGCTGACGATAACGCCGACGGCGACGCCAACGGCGGCGTCATTTACCTCCACGGCGACCTCGCCTTAAAAATCATCGAGGCTCGCCAGTTACCCAACATGGACATCTTCTCAGAGCGTTTCCGCCGCTGCGTAACCGCCTGCGACACCATCAATTGCACCTCCTCCGACCCCGCCGACGGGGGAAATCGCCGCGAACACCGCCACCGCCGGAAGATCATCACCAGCGACCCCTACGTTACGGTCTCAGTGCCGCAGGCCACCGTCGCCCGCACGCGCGTGCTCAAGAACGCCAGTAAGCCCATCTGGAACGAGAGTTTCAACATCCCGCTCGCTCACCCCGTCGTCGACCTGGAGTTTCGCATCAAGGACGATGACGTCTTCGGCGCTGAGACTATGGGCACCGTTAAGATCCCGGCGAAGCAGATCCTCTCCGGTGAGGAGATTTCCGGGTGGTTCCCTCTCATTGGATCATACGGGAAGCCGCCGAAGCCGGACACCGCGCTGCGCATCGAGATGAAGTTCACGCCGGTGGCGGAGAACCCGCTGTACCGGACTGGCATTGCGGCGGATCCAGAGCACAGGGGCGTGAGGGATACTTATTTTCCGGTGAGGAAGGGGAGCTCGGTGAGGTTGTACCAGGACGCACATTGCTCCGATGGGTTTCTGCCGGAGATTCAGCTCGACGGTGGGAAGGTTTACAGGCACGAGAAGTGCTGGGAAGATATCTGCTATGCTATATCGGAGGCTCATCACTTGGTGTATTTGACGGGTTGGTCAATCTACCACAAGGTGAAGATTGTGAGGGAACCTTCTAGGCCTTTACCCCGTGGTGGAGATTTGACTCTTGGCGAGTTGCTCAAGTACAAGTCTGAAGAAGGGGTTAGGGTTCTGTTGCTGGTTTGGGATGATAAGACTTCTCACGATAAGCTCTTCTTCAAGTCGGCTGGAGTAATGCAGACTCATGATGAGGAAACTAGGAAGTTTTTCAAACATTCTTCTGTGATGTGTGTTTTGGCGCCTCGGTACGCCAGCAGCAAGCTGAGCTTCTTGAAGCAACAGGTTGTTGGAACCGTGTTCACGCACCACCAAAAATGTGTTATTGTGGACACACAGGCCGCTGGTAATAACCGAAAGTTAACTGCTTTTATAGGAGGTCTTGATCTATGTGATGGACGCTATGACACTCCTGAGCATCGGCTTTTTCGTGACCTTGACACTGTATTTTCTGAAGATTTCCACAATCCTACATTTGCTTCTGGAACAAAGGCTCCTAGACAACCGTGGCATGATTTGCACTGCAGAATAGATGGGGCTGCTGCTTATGATGTTCTTATTAATTTTGAGCAGCGATGGAGAAAAGCAACTAAGTGGAAAGAGTTTGCAATTCTTTTCAAACAAACCTCCCAGTGGAACGATGATGCGTTAATACGTTTGGAACGCATCTCGTGGATTTTAAGTCCTTCCCAACCTTCCTCAAAGAATAAATATACAATTGTTCCGGAGGATGACCCTGGAGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCCTGAAAGGATTTCCCAAACGTGTGGATGTTGCTCTAGCTCAGAATCTTATCTGTGCCAAAAATTTGGTTATAGACAAAAGCATTCAAACAGGATACATTCAAGCGATCAGATCTGCTCAGCATTTTATTTATATTGAAAACCAGTACTTTATTGGATCTTCATATGCATGGCCATCGTACAACAACGCAGGGGCTGATAATCTTATCCCAATGGAATTAGCACTGAAAATTGTTAGTAAAATCAGGGCTAAGGAAAGATTTGCTGTATATATTGTTTTACCGATGTGGCCAGAAGGTGATCCTAAATCTGGGGCTATGCAAGAAATCCTTTTCTGGCAGGGCCAGACAATGCAAATGATGTATGATGTTGTTGCTGGAGCATTGAAATCAATGCAGCTTAATGATGTGAACCCACAAGATTACCTCAACTTCTATTGCCTCGGTAATCGAGAGCAATTTAATGAAGAAAGCACAAGCTCAAATGGTGCACCGGTCTCTAGTGCATATAGATGTCGCAGATTTATGATTTATGTGCATGCCAAGGGGATGATCGTTGATGATGAGTATGTTATAGTGGGATCTGCTAATATAAATCAAAGATCTCTGGCTGGTACTAAAGATACTGAGATAGCTATGGGTTCCTATCAACCCCATCACACATGGTCTGCCAGGAAAAGACATCCACATGGCCAGATTTATGGTTACAGAATGTCACTTTGGAGCGAGCATCTTGGCATGTTAGATGAAACTTTTGAGGAACCAGAGAGATTGGACTGTGTGCGTAAGGTGAATGCAATTGCAGAAGATAATTGGAGAAAGTACGCTTCTGAAGATTTCTCACTACTGCAGGGACATCTTCTTAAGTATCCTGTCCAAGTAGATTCTGATGGGAAGATCAGCTCCCTACCTGACTGCGAGAATTTCCCAGATGCTGGAGGTAGGATATTGGGGGCTCACTCCACAACAATTCCAGATATCCTAACAACATAA 2592 0.4807 MAEPGADDNADGDANGGVIYLHGDLALKIIEARQLPNMDIFSERFRRCVTACDTINCTSSDPADGGNRREHRHRRKIITSDPYVTVSVPQATVARTRVLKNASKPIWNESFNIPLAHPVVDLEFRIKDDDVFGAETMGTVKIPAKQILSGEEISGWFPLIGSYGKPPKPDTALRIEMKFTPVAENPLYRTGIAADPEHRGVRDTYFPVRKGSSVRLYQDAHCSDGFLPEIQLDGGKVYRHEKCWEDICYAISEAHHLVYLTGWSIYHKVKIVREPSRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLFFKSAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKLSFLKQQVVGTVFTHHQKCVIVDTQAAGNNRKLTAFIGGLDLCDGRYDTPEHRLFRDLDTVFSEDFHNPTFASGTKAPRQPWHDLHCRIDGAAAYDVLINFEQRWRKATKWKEFAILFKQTSQWNDDALIRLERISWILSPSQPSSKNKYTIVPEDDPGVWVSSEDDPENWHVQIFRSIDSGSLKGFPKRVDVALAQNLICAKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYNNAGADNLIPMELALKIVSKIRAKERFAVYIVLPMWPEGDPKSGAMQEILFWQGQTMQMMYDVVAGALKSMQLNDVNPQDYLNFYCLGNREQFNEESTSSNGAPVSSAYRCRRFMIYVHAKGMIVDDEYVIVGSANINQRSLAGTKDTEIAMGSYQPHHTWSARKRHPHGQIYGYRMSLWSEHLGMLDETFEEPERLDCVRKVNAIAEDNWRKYASEDFSLLQGHLLKYPVQVDSDGKISSLPDCENFPDAGGRILGAHSTTIPDILTT* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0592 863 CDD C2_plant_PLD 17 180 - -
Lja2g0592 863 PANTHER PHOSPHOLIPASE D 17 863 IPR015679 -
Lja2g0592 863 Gene3D Endonuclease Chain A 526 757 - -
Lja2g0592 863 SMART C2_3c 24 156 IPR000008 -
Lja2g0592 863 Pfam Phospholipase D C terminal 782 852 IPR024632 -
Lja2g0592 863 Gene3D C2 domain 22 188 IPR035892 -
Lja2g0592 863 SUPERFAMILY Phospholipase D/nuclease 204 467 - -
Lja2g0592 863 Pfam C2 domain 23 159 IPR000008 -
Lja2g0592 863 Gene3D Endonuclease Chain A 231 481 - -
Lja2g0592 863 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 362 397 IPR001736 GO:0003824
Lja2g0592 863 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 708 735 IPR001736 GO:0003824
Lja2g0592 863 PANTHER PHOSPHOLIPASE D DELTA 17 863 - -
Lja2g0592 863 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 21 182 IPR035892 -
Lja2g0592 863 PIRSF PLD_plant 11 863 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lja2g0592 863 Pfam Phospholipase D Active site motif 362 397 IPR001736 GO:0003824
Lja2g0592 863 SUPERFAMILY Phospholipase D/nuclease 560 789 - -
Lja2g0592 863 SMART pld_4 708 735 IPR001736 GO:0003824
Lja2g0592 863 SMART pld_4 362 397 IPR001736 GO:0003824
Lja2g0592 863 Pfam PLD-like domain 567 744 IPR025202 -
Lja2g0592 863 ProSiteProfiles C2 domain profile. 4 157 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0592 Lja-Chr2 5303365 5310739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0592 18 699 Phospholipase D Gene Family (Wang group) AT4G35790 72.093 0.0 1044
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0592 K01115 - gmx:100801787 1502.65