Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0580 ATGGAAGAGGTTTGGAAAGACATAAACCTTGCTTCCTTGAATGACCACAACACTCACCCCTCCACAACCCATTCCACCTTTGGGGGTGCAATCTTTCAGGACTTTCTTGGTGGACACTTTCCACCAAACACCACCGTCTCTTCTTCCTCTCTTTCTGCTTCTCCACAAAGCACCTCTCTGTATTCCCCTGCTCCACCACTCGTCACCGCTCTCAGCTTGAACGCTCGCCCTGACTTCGCGTTTGATCCTCTCAGGCCCAACAACAAATCACAGTTACCGCAACCCCTTCACCACCACCACCACCCTCCCTCAAAGCCTTCTTCCCCTTGTTTCCCCATTAATCCACCTCCACCTTTCGACAACCACCTCCCCTTCACTTCCCCACTACCCTGTTTTGGAAGCAACAAGAGGTTCGCTGAACCTGCTGATTACGGCCTCGGGGACAGACGAAACAAGCGTATGATCAAGAATCGTGAGTCTGCTGCACGATCAAGGGCTTACACAAATGAGCTGAAGCATAAAGTTGATCATTTGCTGGAAGAAAATGCAAGGCTCAAAAGACAGCAACAAGAGTTGTGGGAAGCTGCAGCGGGTCAACAAAAGAAGAAGAGCAACCTATACCGATCAGCTACAGCTCCATTTTGA 645 0.5008 MEEVWKDINLASLNDHNTHPSTTHSTFGGAIFQDFLGGHFPPNTTVSSSSLSASPQSTSLYSPAPPLVTALSLNARPDFAFDPLRPNNKSQLPQPLHHHHHPPSKPSSPCFPINPPPPFDNHLPFTSPLPCFGSNKRFAEPADYGLGDRRNKRMIKNRESAARSRAYTNELKHKVDHLLEENARLKRQQQELWEAAAGQQKKKSNLYRSATAPF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0580 214 CDD bZIP_plant_BZIP46 149 199 - -
Lja2g0580 214 SMART brlzneu 145 205 IPR004827 GO:0003700|GO:0006355
Lja2g0580 214 Pfam bZIP transcription factor 149 196 IPR004827 GO:0003700|GO:0006355
Lja2g0580 214 Coils Coil 168 188 - -
Lja2g0580 214 MobiDBLite consensus disorder prediction 81 111 - -
Lja2g0580 214 SUPERFAMILY Leucine zipper domain 149 194 IPR046347 GO:0003700|GO:0006355
Lja2g0580 214 Gene3D - 148 198 - -
Lja2g0580 214 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 214 IPR043452 GO:0003700|GO:0045893
Lja2g0580 214 PANTHER PROTEIN FD-LIKE 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0580 Lja-Chr2 5198392 5199255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0580 1 170 bZIP Transcription Factor Family AT4G35900 40.415 7.53e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja2g0580 bZIP_1 5.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0580 K14432 - gmx:102660922 159.458