Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0570 ATGAAGTTTTCCTCTCAAGTGCTTTTTTCTCAGTTGCCTGTTGTCATTCTTTGGTATCTCGCCATAGCTATCAGCTCTCAACGATATGGTTATGCTATCAGCCTACCACATTTTGAAAATGTACCAGCAGTCATTGTGTTTGGGGACTCTATAGTTGATACAGGCAACAACAACTACATCACCACCCAAGTTAAGTGCAATTTCTTACCTTATGGTAGAGACTTTGGTGGAGGAAATCAACCAACTGGAAGGTTCAGCAATGGTTTAGTCCCCTCAGACATCATAGCTGCAAAATTTGGAATCAAAAAGCTTTTGCCGCCTTATCTTGATCCAAATTTGCAACTTCAAGATCTCCTCACAGGTGTAAGCTTTGCCTCCGGTGGTGCTGGATATGATCCTCTAACTTCTGAATTAACATCTGTGATATCACTATCAGATCAATTGGACATGTTCAGGGAGTACAAACAGAAGATAAAGGAAGCAGTTGGAGAGAACAGAACAACAGCAATAATATCTCAGAGCATATACATAGTGTGCATGGGAAGTGATGACATTGCCAACACTTACACTCAATCACCAATTACGCGAGTACGCTTTGATATTCCATCTTACACGGACTTAATGGCTTCACAAGCCTCAAACTTCTTACAGGAGCTTTATAGATTAGGAGCTAGAAGGATAGGAGTATTTGGTGTGCCAGCAATAGGGTGTGTGCCCTCACAGAGAACAATGCATGGAGGCATTCATAGAACATGTTCAGATTCTGAAAACCAAGCAGCAATCCTCTTCAACACCAAGCTCAAATCTCAAATGGATGCCCTTCAAAACAAGTTTCCAGAGACTACGCTTATCTACCTCGATATTTACAATCCATTACTCTATCTTATTCAAAATGGTGCTAAATATGGATTTGAAGTAACAGACAAAGGATGCTGTGGCACAGGAGATATAGAAGTAAGCAAAATGTGCAACCGTTACAGCCTAAAGACATGTTCTGACTCCTCAAGCTACATATTCTGGGATAGTTACCATCCTACGGAAGAGGCCTATCATGCGATTTGTTCTATAGTACTTGACAACAAAGTCAAGGACTTCTTCTGA 1101 0.4087 MKFSSQVLFSQLPVVILWYLAIAISSQRYGYAISLPHFENVPAVIVFGDSIVDTGNNNYITTQVKCNFLPYGRDFGGGNQPTGRFSNGLVPSDIIAAKFGIKKLLPPYLDPNLQLQDLLTGVSFASGGAGYDPLTSELTSVISLSDQLDMFREYKQKIKEAVGENRTTAIISQSIYIVCMGSDDIANTYTQSPITRVRFDIPSYTDLMASQASNFLQELYRLGARRIGVFGVPAIGCVPSQRTMHGGIHRTCSDSENQAAILFNTKLKSQMDALQNKFPETTLIYLDIYNPLLYLIQNGAKYGFEVTDKGCCGTGDIEVSKMCNRYSLKTCSDSSSYIFWDSYHPTEEAYHAICSIVLDNKVKDFF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0570 366 CDD SGNH_plant_lipase_like 42 353 IPR035669 -
Lja2g0570 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 365 - -
Lja2g0570 366 Gene3D SGNH hydrolase 34 361 IPR036514 -
Lja2g0570 366 SUPERFAMILY SGNH hydrolase 43 359 - -
Lja2g0570 366 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
Lja2g0570 366 PANTHER GDSL ESTERASE/LIPASE EXL3 6 365 - -
Lja2g0570 366 Pfam GDSL-like Lipase/Acylhydrolase 44 353 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0570 Lja-Chr2 5135022 5136539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0570 42 353 Pollen Coat Proteome AT1G75910 40.317 4.89e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0570 - - gmx:102668883 547.74