LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g0570	ATGAAGTTTTCCTCTCAAGTGCTTTTTTCTCAGTTGCCTGTTGTCATTCTTTGGTATCTCGCCATAGCTATCAGCTCTCAACGATATGGTTATGCTATCAGCCTACCACATTTTGAAAATGTACCAGCAGTCATTGTGTTTGGGGACTCTATAGTTGATACAGGCAACAACAACTACATCACCACCCAAGTTAAGTGCAATTTCTTACCTTATGGTAGAGACTTTGGTGGAGGAAATCAACCAACTGGAAGGTTCAGCAATGGTTTAGTCCCCTCAGACATCATAGCTGCAAAATTTGGAATCAAAAAGCTTTTGCCGCCTTATCTTGATCCAAATTTGCAACTTCAAGATCTCCTCACAGGTGTAAGCTTTGCCTCCGGTGGTGCTGGATATGATCCTCTAACTTCTGAATTAACATCTGTGATATCACTATCAGATCAATTGGACATGTTCAGGGAGTACAAACAGAAGATAAAGGAAGCAGTTGGAGAGAACAGAACAACAGCAATAATATCTCAGAGCATATACATAGTGTGCATGGGAAGTGATGACATTGCCAACACTTACACTCAATCACCAATTACGCGAGTACGCTTTGATATTCCATCTTACACGGACTTAATGGCTTCACAAGCCTCAAACTTCTTACAGGAGCTTTATAGATTAGGAGCTAGAAGGATAGGAGTATTTGGTGTGCCAGCAATAGGGTGTGTGCCCTCACAGAGAACAATGCATGGAGGCATTCATAGAACATGTTCAGATTCTGAAAACCAAGCAGCAATCCTCTTCAACACCAAGCTCAAATCTCAAATGGATGCCCTTCAAAACAAGTTTCCAGAGACTACGCTTATCTACCTCGATATTTACAATCCATTACTCTATCTTATTCAAAATGGTGCTAAATATGGATTTGAAGTAACAGACAAAGGATGCTGTGGCACAGGAGATATAGAAGTAAGCAAAATGTGCAACCGTTACAGCCTAAAGACATGTTCTGACTCCTCAAGCTACATATTCTGGGATAGTTACCATCCTACGGAAGAGGCCTATCATGCGATTTGTTCTATAGTACTTGACAACAAAGTCAAGGACTTCTTCTGA	1101	0.4087	MKFSSQVLFSQLPVVILWYLAIAISSQRYGYAISLPHFENVPAVIVFGDSIVDTGNNNYITTQVKCNFLPYGRDFGGGNQPTGRFSNGLVPSDIIAAKFGIKKLLPPYLDPNLQLQDLLTGVSFASGGAGYDPLTSELTSVISLSDQLDMFREYKQKIKEAVGENRTTAIISQSIYIVCMGSDDIANTYTQSPITRVRFDIPSYTDLMASQASNFLQELYRLGARRIGVFGVPAIGCVPSQRTMHGGIHRTCSDSENQAAILFNTKLKSQMDALQNKFPETTLIYLDIYNPLLYLIQNGAKYGFEVTDKGCCGTGDIEVSKMCNRYSLKTCSDSSSYIFWDSYHPTEEAYHAICSIVLDNKVKDFF*	367

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g0570	366	CDD	SGNH_plant_lipase_like	42	353	IPR035669	-
	Lja2g0570	366	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE	6	365	-	-
	Lja2g0570	366	Gene3D	SGNH hydrolase	34	361	IPR036514	-
	Lja2g0570	366	SUPERFAMILY	SGNH hydrolase	43	359	-	-
	Lja2g0570	366	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	44	55	IPR008265	GO:0006629\|GO:0016298
	Lja2g0570	366	PANTHER	GDSL ESTERASE/LIPASE EXL3	6	365	-	-
	Lja2g0570	366	Pfam	GDSL-like Lipase/Acylhydrolase	44	353	IPR001087	GO:0016788

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja2g0570	Lja-Chr2	5135022	5136539	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja2g0570	42	353	Pollen Coat Proteome	AT1G75910	40.317	4.89e-75	234

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g0570	-		-	gmx:102668883	547.74

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