Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0566 ATGCTGAAACCTTTAGTTGATCCTGAATATCTCAAGGAGATTGAGAAGGCTCGTAGGGACCTTCGCGCTCTTATCTTCAACAAAAAATGTGCTCCTATCATGCTTCGATTAGCCTGGCACAGTGCTGGTACCTACGATGTTAAAACCAAAACAGGAGGCCCCTATGGCTCTATCAGGAATGAACAAGAGTTGAATCATGCTGCAAATATGGGGTTGAAAATAGCAGTTGACTTATGTGAGGAAGTGAAGGCTAAACATCCAAAAATTTCCTATGCGGATCTTTACCAGCTTGCTGGTGTTGTTGCAGTAGAAGTCACTGGGGGTCCAACAATTGACTTTACTCCTGGTAGAAAGGACTCATTGGAATCTCCACCAGAAGGGCGCCTTCCGGATGCCAAACAAGGTGCATCTCATTTAAGGGAGGTTTTCTATCGCATGGGTCTAAATGACAGAGACATTGTGGCTCTATCTGGTGGTCACACTTTGGGTAAGGCACATAAAGAGCGCTCTGGCTTTGAAGGTCAATGGACAAGAGAGCCTTTGAAGTTTGATAACTCCTATTTTGTGGAGTTACTGAAGGCGGATTCAAAAGACTTATTGAAACTCCCCTCTGACAAAGCTCTTGTTGAAGATCCTGCATTCCGTGTGTATGTTGAACTATATGCGAAGGATGAGGATGCATTTTTCAGAGATTATGCAAGTTCACACAAGAAACTCTCAGAGCTAGGTTTCATCCCCAATAATGGTTCCATTTTGGTCAAGGGAGCTATTGGATTCGCCATTGCCTCAACTGTGGTGATCATTGGTTACTTACTTGAGCTCAGCAGAAAAACCAACTGA 840 0.4381 MLKPLVDPEYLKEIEKARRDLRALIFNKKCAPIMLRLAWHSAGTYDVKTKTGGPYGSIRNEQELNHAANMGLKIAVDLCEEVKAKHPKISYADLYQLAGVVAVEVTGGPTIDFTPGRKDSLESPPEGRLPDAKQGASHLREVFYRMGLNDRDIVALSGGHTLGKAHKERSGFEGQWTREPLKFDNSYFVELLKADSKDLLKLPSDKALVEDPAFRVYVELYAKDEDAFFRDYASSHKKLSELGFIPNNGSILVKGAIGFAIASTVVIIGYLLELSRKTN* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0566 279 CDD ascorbate_peroxidase 4 244 - -
Lja2g0566 279 SUPERFAMILY Heme-dependent peroxidases 5 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 Gene3D - 17 243 - -
Lja2g0566 279 Gene3D Peroxidase, domain 2 130 236 - -
Lja2g0566 279 MobiDBLite consensus disorder prediction 113 133 - -
Lja2g0566 279 Pfam Peroxidase 18 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 4 274 IPR044831 GO:0004601|GO:0034599
Lja2g0566 279 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Lja2g0566 279 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 ProSiteProfiles Plant heme peroxidase family profile. 89 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 4 274 - -
Lja2g0566 279 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0566 279 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0566 Lja-Chr2 5116728 5119253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0566 89 243 Peroxidase AT4G17690 34.737 1.18e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0566 K00434 - gmx:100806101 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0566 2 5116728 5119253 Lja2g0566 2 5116728 5119253 ECH