Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0561 ATGGCTGTTTCAAGGACCCTCTTACCTCGTTGGTCACCACTTGTTCTTCTTCCTTTTGTCTTCTGTATCTCCGCCGCAAAGGTTGTCACGGTTGATGTACATGCAGCAAAGCGTCTCATCCAGAATGGCCACACTTACCTGGATGTTAGGACGGTGAACGAGTTCGTCGAAGGGCATGTAGATGCAGCTAAGATCATTAACATTCCATACATGATAGATACACCCAAAGGTAGGGTGAAGAACCAAGATTTTCTGAAGGAGGTTTCATCTGTTTTTAGCAACAAAGAAGATCATCTCATTGTGGGTTGCAAAAGTGGGGTGAGATCACTGTCTGCAACTGCTGATCTTCTGGCTAATGGTTATAAGAACGTGAACGACATGGGAGGAGGTTACATGGATTGGGTTAGAAACAAGTTTCCAGTGAATGCACCAGCAGACAAAGAGGAGCTATAG 453 0.4503 MAVSRTLLPRWSPLVLLPFVFCISAAKVVTVDVHAAKRLIQNGHTYLDVRTVNEFVEGHVDAAKIINIPYMIDTPKGRVKNQDFLKEVSSVFSNKEDHLIVGCKSGVRSLSATADLLANGYKNVNDMGGGYMDWVRNKFPVNAPADKEEL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0561 150 PANTHER THIOSULFATE SULFURTRANSFERASE 18 22 149 - -
Lja2g0561 150 Pfam Rhodanese-like domain 36 136 IPR001763 -
Lja2g0561 150 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 26 141 IPR036873 -
Lja2g0561 150 ProSiteProfiles Rhodanese domain profile. 40 143 IPR001763 -
Lja2g0561 150 CDD RHOD 35 135 - -
Lja2g0561 150 SMART rhod_4 31 140 IPR001763 -
Lja2g0561 150 Gene3D - 22 143 IPR036873 -
Lja2g0561 150 PANTHER THIOSULFATE SULFURTRANSFERASE 18 22 149 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0561 Lja-Chr2 5082267 5084905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0561 25 147 Sulfurtransferasese or Rhodanese AT5G66170 57.724 1.62e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0561 - K15692 gmx:100815122 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0561 2 5082267 5084905 Lja2g0561 2 5082267 5084905 ECH
Lja2g0561 2 5082267 5084905 Lja4g3122 4 59143689 59146604 PCT