Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0560 ATGTTGTTATTTCCAAGGTTTGAAGGTGGAAAATGGCTAGGATTTGTTACAGCCATATGGGTTCAAGCAATATGTGGAAACAATTACACATTTGCAAACTATTCTGATGTGTTGAAAAGCCTAATGGCTCTGACCCAAATGCAGCTGAACAATCTCTCTGTTGCTAAAGATGTTGGCAAGGCTTTTGGTGTGTTATCTGGTCTTGCTTCTGATCGTTGGCCAACTTCAGTTATTCTCATGATTGGAGCCACCATGGGATTCATTGGCTATGGAGTTCAATGGCTTGTTGTCAGCCACACAATCACTCCACTCCCTTATTGGCTGATGTGTATATTCTTGTGTATGGGAGGAAACAGCTCAACATGGATGAACACAGCAGTGCTTGTCACATGCATGAGAAATTTCCCACAAAACCGTGGCCCAATTTCTGGAATTCTCAAGGGATATGTTGGACTCAGCACAGCAATCTTCACAGACATATGCACAGCTTTGTTTTACTCAGACCCTTCAAAGTTTCTCCTAATGCTCACCATTGTTCCTGCTGTTATTTGCCTCATTGCTGCAATCTTCCTCCATGAATCCCCACCAGCTTCAACCTCAGCAGAGGAAAACAGAGAAACCCAATTCTTCAATGCATTCAATATAATTGCAGTCACAGTAGCTGTCTACCTCTTAGTCTTTGACATCTCAGGACCACACACCCATGTTCTTTCTCTGGTTTTCACAGCAGGGTTACTCATCCTGTTAGCCATGCCACTTCTTGTACCTTTCTACTTTGTCTTCTTCAAATCAAGCCATGGTCTTGACAGAGAAAAACAGAGTGTTCACGAACCGTTGCTCGGCGAAGAAACCAAAAGCGTTGAAGAGAAGGAGGAGAACCATGAAGTGAGTGATGCAATTGCAACCAAGGTGGAGGAGGTTGAGATAAAGCGGAAACCGGTGATAGGGGAGGAGCACACTATCGTTGAAATGGTGAAAACGGTTGATTTCTGGGTTCTGTTTGTGTCGTTTCTCTGTGGAGTGGGAACAGGACTATGTGTGATGAATAACATGGGGCAGATGGGACTAGCACTTGGTTACTCTGATGTTTCTATATTCATTTCATTCATCAGCATTTGGGGTTTCTTTGGACGCATCATTTCTGGATCCCTCTCAGAATACTACATCAGAAAATCAGGCACGCCAAGGCTAGTTTGGAATGCTGCTTCACAAATTCTGATGGCTGGGGGTTACATTACATTGGCCTTGGCCTTACCAGGATCACTTTACATTGGATCAATGTTAGTGGGAATATGCTATGGAGTTCGTCTAACTATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTCAAATACTATGGTTTATTGTACAATATCCTAATTCTCAACCTTCCTATTGGTTCCTTCCTCTTTTCTGGTCTCATCGCTGGTTATCTTTATGATATGGAAGCAACTAGTGTTCCTGAAGGGGGAAACACTTGCATTGGAGCACATTGTTTCATGCTTGTGTATGTGATTATGGCTTTTGCTTGTGTCCTTGGATGTGGATTGGACTTGCTGCTAGCAGCTAGAACAAAGAAGGTTTATTCCAAGATTCATCTAGAGAGAAGTCAAGTCAATTCCTAA 1626 0.4287 MLLFPRFEGGKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNNLSVAKDVGKAFGVLSGLASDRWPTSVILMIGATMGFIGYGVQWLVVSHTITPLPYWLMCIFLCMGGNSSTWMNTAVLVTCMRNFPQNRGPISGILKGYVGLSTAIFTDICTALFYSDPSKFLLMLTIVPAVICLIAAIFLHESPPASTSAEENRETQFFNAFNIIAVTVAVYLLVFDISGPHTHVLSLVFTAGLLILLAMPLLVPFYFVFFKSSHGLDREKQSVHEPLLGEETKSVEEKEENHEVSDAIATKVEEVEIKRKPVIGEEHTIVEMVKTVDFWVLFVSFLCGVGTGLCVMNNMGQMGLALGYSDVSIFISFISIWGFFGRIISGSLSEYYIRKSGTPRLVWNAASQILMAGGYITLALALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFLFSGLIAGYLYDMEATSVPEGGNTCIGAHCFMLVYVIMAFACVLGCGLDLLLAARTKKVYSKIHLERSQVNS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0560 541 SUPERFAMILY MFS general substrate transporter 27 527 IPR036259 -
Lja2g0560 541 Pfam Nodulin-like 11 257 IPR010658 -
Lja2g0560 541 Gene3D MFS general substrate transporter like domains 11 206 IPR036259 -
Lja2g0560 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 538 - -
Lja2g0560 541 CDD MFS_Mch1p_like 10 515 - -
Lja2g0560 541 Gene3D MFS general substrate transporter like domains 209 515 IPR036259 -
Lja2g0560 541 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0560 Lja-Chr2 5078781 5081372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0560 11 541 Nodulin-like Gene Family AT4G34950 63.423 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0560 - - cit:102624072 753.436