Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0544 ATGGCCATTAGAAAGTCCCATAAACTACCACAAGCGGTTATGATCAAGAAAATCCTGAAAAGATGCTCAAGTTTTAGGAAGAAGAAGAGCTATCCTGAAGATGTACCAAAAGGCCACTTTGCAGTGTATGTTGGTGAGAACAGGACAAGACACATTGTTCCAATTTTATGGCTGAATCACCCACAGTTTCAAGGTCTTCTGAAAAGAGCTGAGGAGGAGTTTGGCTTCTGCCATGACATGGGACTCACCATTCCCTGTGATGAAGTGGTTTTTGAGTCCATAATCTCACTGATGAAGTGGGTTAGACATTAA 312 0.4199 MAIRKSHKLPQAVMIKKILKRCSSFRKKKSYPEDVPKGHFAVYVGENRTRHIVPILWLNHPQFQGLLKRAEEEFGFCHDMGLTIPCDEVVFESIISLMKWVRH* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0544 103 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 98 - -
Lja2g0544 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 98 IPR003676 GO:0009733
Lja2g0544 103 Pfam Auxin responsive protein 21 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0544 Lja-Chr2 4900041 4900352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0544 5 98 Calmodulin-binding Proteins AT4G34750 44.898 2.94e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0544 K14488 - gmx:100798840 161.384