Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0520 ATGGATTCGCTTCCAACATGGCAAACCATAGCCAACCTCAGACATGAACAACTCCCTATGGCTTTCTTGTTCATGGTCCCAATGTTACTACTGTTGGGTTTAGCCTCTAGAATTCGCAAAAGACCACCATACCCGCCAGGCCCAAAAGGCTTACCCATCATAGGCAACATGCTCATGATGGACCAGTTAACCCACCGAGGCTTAGCCACCCTTGCAAAACAATACGGCGGCATCTTCCACCTCCGCATGGGGTTCATCCACATGGTGGCGGTTTCCGACCCCGACGCAGCCCGCCAGGTCCTCCAAGTCCACGACAACATCTTCTCCAACCGGCCAGCCACCATAGCCATTAGCTACCTCACCTACGACCGCGCCGACATGGCGTTCGCCCACTACGGCCCCTTCTGGCGCCAGATGCGCAAACTCTGCGTGATGAAGCTCTTCAGCCGCAAACGCGCAGAGTCTTGGCAGTCCGTCCGGGATGAGGTCGACGCCGCAGTACGCGACGTCGACCAAAACACCGGCACCCCGGTAAACATTGGTGAGGTAGTGTTCAACCTCACCAAGAACATCATCTACCGTGCCGCCTTCGGGTCGAGCTCGAAGGAGGGGCAAGATGAGTTCATTGGGATATTGCAAGAATTCTCCAAGCATTTTGGAGCTTTCAACATAGCAGATTTCATTCCTTATATTGGCGCCATCGATCCTCAGGGGCTGAACGCAAGGCTCGTGAAGGCACGTGCAGCGTTGGATAGCTTCATCGGGAAGATTATTGACGAGCACGTGCAGAAGAAGAGGGGTGGTGGTGGTGGCGTGGATGGTGATGGAGAAACGGACATGGTGGATGAGTTGCTGGCTTTCTACACGGAGGAGGAGGTGGCGGGTAGTAAAGGGAGTAGTAATGAGTCGGAGGATTTGCAGAACTCAATCAAGCTCACCAAGGATAACATCAAAGCAATCATTATGGATGTGATGTTTGGAGGTACAGAGACAGTAGCTTCAGCAATCGAGTGGGCCATGTCGGAGCTAATGAAAACTCCAGAAGAACTCAAGAGGGTTCAACAAGAGCTCGCTGACGTGGTGGGCTTGGACCGCGTGGTCGAGGAGTCCGATTTTGAAAAACTCACTCATTTGAAGTGTGCATTGAAAGAGACCTTGCGCCTCCACCCACCGATCCCGCTCCTCCTCCACGAGACGGCGGAGGATGTGACGATCGGCGGCTACTTCATCCCAAAGAAGGCACGCGTGATGATCAACGTGTGGGCCATCGGGAGAGACAAGAATTGTTGGGAGGAACCTAACAGTTTCAAACCCTCCCGGTTCTTGAAACCTGGCGTGCCAAATTTCAAAGGGAGCAACTTCGAGTTTATTCCATTCGGATCGGGTCGCAGGTCCTGCCCCGGGATGCAACTGGGTCTGTACGCGCTTGACTTGGCGGTGGCTCACCTCCTTCATTGTTTCACGTGGGAACTGCCGGACGGGATGAAACCCAGTGAGATGGACATGAGCGATGTGTTTGGACTCACCGCTCCAAGGGCGAGTCGACTCGTTGCCATACCCACCAAGCGTGTTGTCTGTCCACTGTCTTAG 1590 0.5396 MDSLPTWQTIANLRHEQLPMAFLFMVPMLLLLGLASRIRKRPPYPPGPKGLPIIGNMLMMDQLTHRGLATLAKQYGGIFHLRMGFIHMVAVSDPDAARQVLQVHDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAAVRDVDQNTGTPVNIGEVVFNLTKNIIYRAAFGSSSKEGQDEFIGILQEFSKHFGAFNIADFIPYIGAIDPQGLNARLVKARAALDSFIGKIIDEHVQKKRGGGGGVDGDGETDMVDELLAFYTEEEVAGSKGSSNESEDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMSELMKTPEELKRVQQELADVVGLDRVVEESDFEKLTHLKCALKETLRLHPPIPLLLHETAEDVTIGGYFIPKKARVMINVWAIGRDKNCWEEPNSFKPSRFLKPGVPNFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAIPTKRVVCPLS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0520 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lja2g0520 529 Gene3D Cytochrome P450 37 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 16 528 - -
Lja2g0520 529 PANTHER CYTOCHROME P450 84A1-RELATED 16 528 - -
Lja2g0520 529 SUPERFAMILY Cytochrome P450 38 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0520 529 Pfam Cytochrome P450 45 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0520 Lja-Chr2 4693102 4696741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0520 52 528 Monolignol Biosynthesis Gene Families AT4G36220 75.941 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0520 K09755 - gmx:100783430 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0520 2 4693102 4696741 Lja2g0520 2 4693102 4696741 ECH