Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0505 ATGGTAGCTGAACGAGCTAAGCTGCACTTAGCTTTAACGTTTTTGCAATTTTGTTATGCAGGAAACCACATATTTGTGAGGATTGCACTTGATTCAGGCGTCAGCAAGCTTGTATTTCCTGTCTATAGAAACATCACTGCTCTTCTTCTTCTGGGTCCCTTAGCTTATTTTTCAGAGAAGAAAGACAGGCCATCAATAACCAGATATTGTCTTGTCCAATTTTTCCTTCTAGGACTTGTTGGAATAACATTGAAAGAAGGGTTCTACCTTTTGGGTTTGGATAACACTTCACCTACCTTTGCTGCTGCTATGCAGAACTCTGTTCCAGCTCTGACCTTTCTCATGGCTGTAGTACTCAGATATGAGAGTGTGCACTTCAATAGGATGGATGGTCTGGCTAAGGTTCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAGGGACCTACAATTTATACGCCAAATTTAGCACTGCATCAGGAGCAATTCTTGTCTGTACTCAGGGATGTCACAGCAAAAAACATGAACATGGGTGGCATTTATCTTTTTGGTCACTGCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAATTACTCAGCTCCACTCACAGTTTCTGCGTTTACTTGCTTCTTTGGTATTGTGCAGTTAATAACAATTGCAGCCTTTTTCGAGAAGGATCCAAAAGCCTGGCAACTCAATTTTAGTGAAGAGATTTACAGCATTTTGTACTCGGGTCTGGTGAATTCAGGGCTGGCAGCAGCATTACAGATATGGACTATTGGCAAGGGAGGGCCAGTGCTTGCTTCAATTTATCTGCCCCTACAGACATTACTTGTTGCATTGATGGCATCCATTGTTTTTGGAGAAGATTTCTTCTTGGGAGGGATTATTGGAGCTTTCTTAATTATAACCGGCTTATACCTTGTTGTGTGGGGAAGAAGTCAAGAAACCAAGTCTGCCAAGGAGTGCATGAGAGTCCCCATTATTGAGTCAGAGAAACATCCGGAAGAAAAAAGTTACACTGCTTCTCTCATGCAACAATTGATTCCTACACAAAATGTTTAG 1095 0.4164 MVAERAKLHLALTFLQFCYAGNHIFVRIALDSGVSKLVFPVYRNITALLLLGPLAYFSEKKDRPSITRYCLVQFFLLGLVGITLKEGFYLLGLDNTSPTFAAAMQNSVPALTFLMAVVLRYESVHFNRMDGLAKVLGVLASVGGASIITLYKGPTIYTPNLALHQEQFLSVLRDVTAKNMNMGGIYLFGHCLCWSGWIVMQAFVLKNYSAPLTVSAFTCFFGIVQLITIAAFFEKDPKAWQLNFSEEIYSILYSGLVNSGLAAALQIWTIGKGGPVLASIYLPLQTLLVALMASIVFGEDFFLGGIIGAFLIITGLYLVVWGRSQETKSAKECMRVPIIESEKHPEEKSYTASLMQQLIPTQNV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0505 364 PANTHER WAT1-RELATED PROTEIN 5 343 - -
Lja2g0505 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 324 - -
Lja2g0505 364 Pfam EamA-like transporter family 16 133 IPR000620 GO:0016020|GO:0016021
Lja2g0505 364 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Lja2g0505 364 PANTHER WAT1-RELATED PROTEIN 5 343 IPR030184 GO:0016021|GO:0022857
Lja2g0505 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0505 Lja-Chr2 4581927 4583871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0505 2 349 Nodulin-like Gene Family AT1G75500 57.627 1.76e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0505 - - aprc:113869449 585.104