Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0504 ATGGTAGCTGAACGAGCTAAGCTGCACTTAGCTTTAACGTTTTTACAGTTTTGTTATGCAGGAAATCACATATTTGTGAGGATTGCACTTGATACAGGCGTCAGCAAGCTTGTGTTTCCTGTCTATAGAAACATCACTGCTCTTCTTCTTCTGGGTCCCCTCGCTTATTTTTCAGAGAAGAAAGACAGGCCATCAATAACCGGTTACTGTCTACTACAATTTTTCCTTCTAGGACTTGTTGGAATAACATTGAAAGAAGGATTGTACCTTTTGGGTTTGGATAACACTTCACCTACCTTCACTTCTGCTATGCAGAACTCTGTTCCAGCTTTGACCTTTCTCATGGCTGTCATACTCAGATATGAGAGTGTGCACTTCAATAGGATAGATGGTCTGGCTAAGGTCCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAGGGGCCTACGATTTATACGCCAAATTTAGCACAGCATCAGGAGCAATTCTTGTCTGTGCTCCGGGATGTCACAGCAAAAAACATGAACATGGGTGGCATTTATCTTATTGGTCACTGCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAACTACTCAGCCCCTCTCACAGTTTCTGCGTTTACTTGCTTCTTTGGTATTGTGCAGTTTATAACAATTGCAGCCTTTTTCGAGAAGGATCCCAAATCCTGGCAACTCAATTCTAGTCAAGAGATCTACAGCATTTTGTATTCGGGTCTGGTGTTTTCAGGGCTGGCAGCAGCATTACAGATATGGGCTATTGGCAAGGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCTTTACAGACATTACTTGTAGCCTTGATGTCATCCATTGTTTTTGGAGAAGATTTCTTCTTGGGAGGGATTATTGGAGCTTTCTTAATTATGACGGGCTTATACCTTGTTGTGTGGGGAAGAACTCAAGAAACCAAGTCTGCCAAAGAGTACATGAAAGTCCCCATTGAGTCTGAGAATCACCCGGAAGCAAAAATTGGGAGTGGTTCTCTCATGCAACAATTGATTCCTACACAAAATGTTTAG 1092 0.4231 MVAERAKLHLALTFLQFCYAGNHIFVRIALDTGVSKLVFPVYRNITALLLLGPLAYFSEKKDRPSITGYCLLQFFLLGLVGITLKEGLYLLGLDNTSPTFTSAMQNSVPALTFLMAVILRYESVHFNRIDGLAKVLGVLASVGGASIITLYKGPTIYTPNLAQHQEQFLSVLRDVTAKNMNMGGIYLIGHCLCWSGWIVMQAFVLKNYSAPLTVSAFTCFFGIVQFITIAAFFEKDPKSWQLNSSQEIYSILYSGLVFSGLAAALQIWAIGKGGPVLASIYLPLQTLLVALMSSIVFGEDFFLGGIIGAFLIMTGLYLVVWGRTQETKSAKEYMKVPIESENHPEAKIGSGSLMQQLIPTQNV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0504 363 PANTHER WAT1-RELATED PROTEIN 5 343 - -
Lja2g0504 363 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Lja2g0504 363 Pfam EamA-like transporter family 16 144 IPR000620 GO:0016020|GO:0016021
Lja2g0504 363 PANTHER WAT1-RELATED PROTEIN 5 343 IPR030184 GO:0016021|GO:0022857
Lja2g0504 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
Lja2g0504 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0504 Lja-Chr2 4578652 4580826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0504 2 330 Nodulin-like Gene Family AT1G75500 58.806 2.68e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0504 - - aprc:113869449 591.652