Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0498 ATGGTCAATTCTATAAAATGTCTCCTGCTTCTTTCTCTAGCCTTTGTTCCATTCTGTCACTGCAAAAAGGAACAAGGGGTTAACCTCTACCCACAATTTTACGACCAATCATGCCCCAAAGCTCAAGAGATTGTCAAGTCCATTGTTGCCAAGGCTTTTGCGAAAGATCCCCGCATGGCCGCCTCGCTTCTTAGACTACACTTCCATGACTGTTTTGTCAAGGGTTGTGATGGATCAGTGTTGCTAGATAGCAGTGGAACCATCATCAGTGAGAAGAGGTCAAATCCAAACCGCAATTCAGCTCGAGGATTTGAAGTCATAGATGAAATTAAATCTGCAATAGAAAAAGAATGCCCTCACACTGTGTCTTGTGCTGACATTTTGGCTATAGCTGCAAGAGATTCAACTGTTCTGACTGGTGGACCAAGCTGGGGTGTACCTTTGGGAAGAAGGGACTCTCTTGGTGCAAGCCTCAGTGGCTCAAATCAGAACATTCCAGCCCCCAACAACACATTCCAGACTATCCTAACTAAATTCAAGCTTAAGGGGCTTGACATAGTTGATCTAGTTGCACTATCTGGGAGCCACACCATAGGAGATTCTAGGTGCACCAGCTTCAGGCAAAGACTCTACAACCAAACTGGAAATGGCAAAGCAGACTTCACTCTTGACCAATCCTATGCTGCTAAATTGCGCACTCAGTGTCCAAGATCTGGTGGGGACCAGAATCTGTTTGTGCTAGACTTTGTCACCCCAGTAAAATTTGACAACAACTACTTCAAGAACTTGCTGGCATTCAAGGGTCTGCTGAGTTCTGATGAGATCCTCTTGACAGATAATAAAGAATCTGCAGATTTAGTGAAGAAGTATGCTGAGAGAAACGATCTTTTCTTTGAACAATTTGCCAAGTCCATGGTTAAGATGGGAAACATTACTCCTTTAACAGGGTCAAGGGGAGAGATCAGAAGGATCTGCAGAAGGATTAACAACTAA 993 0.4391 MVNSIKCLLLLSLAFVPFCHCKKEQGVNLYPQFYDQSCPKAQEIVKSIVAKAFAKDPRMAASLLRLHFHDCFVKGCDGSVLLDSSGTIISEKRSNPNRNSARGFEVIDEIKSAIEKECPHTVSCADILAIAARDSTVLTGGPSWGVPLGRRDSLGASLSGSNQNIPAPNNTFQTILTKFKLKGLDIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKADFTLDQSYAAKLRTQCPRSGGDQNLFVLDFVTPVKFDNNYFKNLLAFKGLLSSDEILLTDNKESADLVKKYAERNDLFFEQFAKSMVKMGNITPLTGSRGEIRRICRRINN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0498 330 PANTHER PEROXIDASE 72-RELATED 7 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 Pfam Peroxidase 45 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lja2g0498 330 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Lja2g0498 330 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Lja2g0498 330 Gene3D - 33 329 - -
Lja2g0498 330 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 SUPERFAMILY Heme-dependent peroxidases 29 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja2g0498 330 Gene3D Peroxidase, domain 2 166 309 - -
Lja2g0498 330 PANTHER PEROXIDASE 7 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0498 Lja-Chr2 4532193 4534680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0498 1 330 Peroxidase AT5G66390 76.647 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0498 K00430 - gmx:100788562 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0498 2 4532193 4534680 Lja2g0498 2 4532193 4534680 ECH
Lja2g0498 2 4532193 4534680 Lja4g3192 4 60380396 60382606 ECH