Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0480 ATGGACACTCCAAATTTGAAACCAATCTCCTCATACAAGAAGGGGCGAAGCGGTTATGAACCCTCAGACACAGAAACTGAGTGGCATGATACTCCACGCCATGAACGAGAAAGAAGGAACTTGAATTTTGGTCCTGAAGAAGCAAAGGCTCTGAATCTCATGAGCAATCACAGAAGGCACCAAAGCAAGTCACCTTATAGGCCACACATAGCAGTTAACAATGAAGATGATGATGCTTCGTTATCATACACAACAACAGGTTCGAACATGCGGAGAAATATCAGTCCTTTGCCTAGGCCTGACCTTGGTAGAACAGTGTCTCCTTTTAACAGACATCGCCTTGAGCAAAGAGAAAACAGAGGAAAAACTGGTTCAGTGCTTCTTGATGTGGAAAGAGTGACTGAGAAGCCAATGTTCAGAAGAGCAGTGACTGCTCCAAGATTGAGGGAGCAACAGATCAAACCTTTGCAAAATGGGGGAAGAACCCCCAAGATTTTGAAAGCACCTTCAGTTGGTGAAATCAATGAAATGATAGCTCAGGTGAAATTATCCAAAAACCACCCTAATGGTGATTTTTCATCATCACAGCTAGAAAGTACTGAGTCCATTCAACCAGGTGATCTTTTCTTTTCTCGTGAATGCAATGCCTTGCAAGGGAATAAGAATACTTCTTTGCAGAAAAATATTCAGCAATTTGGGTATTTTAGTCCAAGACCCCCAATGGTTACTACCATCAATCCAATGAGAGAAAATGGTAACCTCAATATCCGAGGAACCTCTTCTAGTGCCTTATCTCGTTCGACTACGAGGACAAGTAGTAGAAAGGGGAGTGTTACAGGGAAGCCAAGTTCCAGTGCTAGTGTGAGCAGTGCAAGCACATGGAAATTCACATCCAATATAAAGAAGGCTCAGAAAGATACATGGTTGGGTTGTATGATGAGAACAGGAAACTGCAGGACAACAAGAAAATCGCCTGAACGACGGCCCATTGATGAAGGTTCTTTGATTGAGAAGGCGGTTGTAGCAGAAAGTCTACCGGAATTCTGGGCAGATAAACACCAACCTGATTCGCTTAATGGCTTCATCTGCAACAGACAAGAAGCTCAGCTTCTCAAGGAATTAGTGTCTCAGGGCTCTTGTCCTCATATTTTACTCAAAGGACCCCCTGGTTCAGGAAAAAGAGAACTTGCAAGAGCTCTTCTTCGAGAAATATACGGTGATGCATGCTGTAATCTGTCCCATGATTTAAGACATTTCCAGGACAAAAGAACAATGAAAGTGTCCGTTCCAGTAACATCCAGTTCTCATCACATGGAGCTCAATGTAAATTCAGAACCAAATGTCAAATATGCTTTAATGGGATTGATCAAAGAAATTAGCAATATTTATGCAATTGCCCCTGAAGTCAGCAATATGAATTTCAAGTCAGATTATAAAGTGATAATTCTTTATGAGGTCGACAAAGCAGTAGAGAACATCCAGCACTTGATCAAATGGATTATAGACCGCTATTCAGATACATGCAAATTAGTACTTTGCTGTGAAGATGATGCTAACATTATTGGACTTGTGAAAAACCGTTTCAAAGTTATCAAAGTTGATCCACCTCAAACTCATCAAATTATGGAGGTTCTTATTCAGATAGCAAACCAAGAGGAAATTGATCTATCCAAGAATTTTGCTATGAAGATTGCTACAAGATCTAAGCATAACCTCAGGGAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTTCTGTTGGATGGGAGAAGATCATTTTAGAAGTTGCTGCAGAGATTCTAGCTGATCCATCATTTTCACGCTTACTCTCCATACGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCCAAATTGATTCTCCTGAAACTTGTGGATCAGCTCCTAAAAAGAATTGATGGCAGCTTAAAAAGGGAGCTCTACTACTGGCATGCTTATTATGACAGAAGACTCCCACCAGGAACAACAGCTTTACTAAAATTAGAAGAATCTGTGGCCAAGTTCATGAGCATATGCAGAAAAAGCTCTGGCACTCGGCAATATGTGTAG 2106 0.4107 MDTPNLKPISSYKKGRSGYEPSDTETEWHDTPRHERERRNLNFGPEEAKALNLMSNHRRHQSKSPYRPHIAVNNEDDDASLSYTTTGSNMRRNISPLPRPDLGRTVSPFNRHRLEQRENRGKTGSVLLDVERVTEKPMFRRAVTAPRLREQQIKPLQNGGRTPKILKAPSVGEINEMIAQVKLSKNHPNGDFSSSQLESTESIQPGDLFFSRECNALQGNKNTSLQKNIQQFGYFSPRPPMVTTINPMRENGNLNIRGTSSSALSRSTTRTSSRKGSVTGKPSSSASVSSASTWKFTSNIKKAQKDTWLGCMMRTGNCRTTRKSPERRPIDEGSLIEKAVVAESLPEFWADKHQPDSLNGFICNRQEAQLLKELVSQGSCPHILLKGPPGSGKRELARALLREIYGDACCNLSHDLRHFQDKRTMKVSVPVTSSSHHMELNVNSEPNVKYALMGLIKEISNIYAIAPEVSNMNFKSDYKVIILYEVDKAVENIQHLIKWIIDRYSDTCKLVLCCEDDANIIGLVKNRFKVIKVDPPQTHQIMEVLIQIANQEEIDLSKNFAMKIATRSKHNLREAIMALEACKAHNYPFSEEQPISVGWEKIILEVAAEILADPSFSRLLSIRGKFQMLLLDFVHPKLILLKLVDQLLKRIDGSLKRELYYWHAYYDRRLPPGTTALLKLEESVAKFMSICRKSSGTRQYV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0480 701 MobiDBLite consensus disorder prediction 83 107 - -
Lja2g0480 701 MobiDBLite consensus disorder prediction 18 44 - -
Lja2g0480 701 Gene3D - 347 536 IPR027417 -
Lja2g0480 701 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 167 700 - -
Lja2g0480 701 Gene3D - 598 691 - -
Lja2g0480 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 584 IPR027417 -
Lja2g0480 701 SUPERFAMILY post-AAA+ oligomerization domain-like 598 690 IPR008921 GO:0003677|GO:0006260
Lja2g0480 701 MobiDBLite consensus disorder prediction 249 289 - -
Lja2g0480 701 CDD AAA 364 404 - -
Lja2g0480 701 Gene3D - 538 595 - -
Lja2g0480 701 PANTHER OS02G0704966 PROTEIN 167 700 - -
Lja2g0480 701 MobiDBLite consensus disorder prediction 1 45 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0480 348 690 Core DNA Replication Machinery Family AT5G27740 36.494 8.93e-74 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0480 K10756 - gmx:100795321 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0480 2 4366222 4370213 Lja2g0480 2 4366222 4370213 ECH