Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0450 ATGTCTGACTCACACCCAAGTTTGTGTTCTCTTCCAAGCATTCTTGCTCTTCTTCTAATCTTCATCTTCATTCTCATCAAAAGAAAGCAAGGCAAACCCAAGCTTAATCTTCCCCCAGGGAAAATGGGTTGGCCCTTTCTTGGGGAAACCATAAGTTATTTGAAACCTTACTCTGCCACTACAGTAGGAGAATTCATGGAACAGCACATAGCAAGGTATGGTAAAATTTACAAGTCGAACTTGTTTGGGGGGCCAGCAATAGTGTCAGCAGATGCAGGGCTGAACAGGTTCATATTACAGAACGAAGGGAAATTGTTTGAGTGCAGCTATCCAAGAAGCATTGGTGGAATACTAGGAAAATGGTCTATGTTGGTTCTTGTTGGTGACATGCACAGGGACATGCGGGTCATTTCACTCAATTTTCTTAGCCATGCCAGGCTCAGAACACATCTCTTGAAAGAGGTGGAGCAACATACTCTGCTGGTTCTAAACTCTTGGAAGGAAAATTGCACATTCTCAGCTCAAGATGAAGCCAAGAAGTTCACCTTCAATTTGATGGCCAAACACATCATGAGCCTCCATCCTGGGAATATAGAGACAGAGCAGCTGAAGAAAGAGTATGTCACTTTTATGAAAGGGGTGGTATCAGCTCCACTGAATTTTCCAGGAACTGCATACAGAAGGGCATTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGAATGAAAGAATCAAAAGGATCCAAGATGGAAATGAAAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTTTGAAGCACTCAAATCTTTCAACCGAGCAAATCCTTGATTTGGTTCTAAGCTTGCTCTTTGCTGGCCATGAAACTTCATCAGTTTCCATAGCTCTAGCTATTTACTTCTTGCCAGGTTGTCCTCAAGCTATGCAACAGTTGAGGGAAGAGCACAATGAAATTGCCAGACTCAAGAAACAGGCAGGGGAAGTTGAATTGACTTGGGAAGACTACAAACGAATGGAATTTACTCACTGTGTTGTGAATGAGACACTTAGATTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCCCTAAAAGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCAGTAATTGCAGCCGTGCATCTTGATCCTTCACTTTTTGACCAACCTCAACGCTTCAATCCATGGAGATGGCAGGTATCTTCCGGCGGAAGCAATACTGTCCGAGCTGGAAATGATGGTAGTTGTGGCGGTTGCCCAAGCTCAAGCACGGGGAGTAACAACACGTTCCTCCCGTTCGGAGGAGGACCGCGGCTATGCGCGGGGTCGGAGTTAGCCAAGCTTGAAATGGCTGTTTTTATCCACCATCTAATCCTCAACTACAATTGGGAATTGGTTGATGATACAGACCAAGCTTTTGCCTACCCTTTTGTCGATTTCCCCAAAGGCCTACCCATCAGAGTCCAATCCAAACCAAACCCAACTCTATGA 1518 0.444 MSDSHPSLCSLPSILALLLIFIFILIKRKQGKPKLNLPPGKMGWPFLGETISYLKPYSATTVGEFMEQHIARYGKIYKSNLFGGPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEQHTLLVLNSWKENCTFSAQDEAKKFTFNLMAKHIMSLHPGNIETEQLKKEYVTFMKGVVSAPLNFPGTAYRRALKSRSTILKFIEGKMNERIKRIQDGNESLEEDDLLNWVLKHSNLSTEQILDLVLSLLFAGHETSSVSIALAIYFLPGCPQAMQQLREEHNEIARLKKQAGEVELTWEDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQRFNPWRWQVSSGGSNTVRAGNDGSCGGCPSSSTGSNNTFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYNWELVDDTDQAFAYPFVDFPKGLPIRVQSKPNPTL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0450 505 Pfam Cytochrome P450 38 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Lja2g0450 505 Gene3D Cytochrome P450 26 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS E-class P450 group IV signature 64 87 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS E-class P450 group IV signature 390 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS E-class P450 group IV signature 449 467 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS E-class P450 group IV signature 279 305 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS E-class P450 group IV signature 433 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PANTHER CYTOCHROME P450 26 66 498 - -
Lja2g0450 505 Coils Coil 307 334 - -
Lja2g0450 505 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 SUPERFAMILY Cytochrome P450 34 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g0450 505 PANTHER BNAC01G23810D PROTEIN 66 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0450 Lja-Chr2 4118891 4123549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0450 27 408 Cytochrome P450 AT3G50660 74.690 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0450 K09587 - gmx:100789515 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0450 2 4118891 4123549 Lja2g0450 2 4118891 4123549 ECH
Lja2g0450 2 4118891 4123549 Lja4g3227 4 60914801 60922660 PCT