Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0440 ATGTCTACTCAAGAAAAAAACAACCCTCACTGCAAACATCCAATGGAAAATAGAAGTGGTGAAAATGGGGAGACTAATAGAAGGCTCAACCTGTATGCCTGTGTCTCTGTGATGGCTGCCTCCATTCTCTCTGCTTTTTACGGTTATGAGGTTGGAGTGATGACCGGAGCACTCTTGTTCATAAAGGAAGATCTGCAAATCAGTGACCTGCAGCTTCAATTCCTGGTAGGCATATTTCACATGTGCGGGCTACCAGCAAGCATGGCGGCCGGAAGAATCTCCGATTACATCGGCCGCCGCTACACCATCATCCTAGCCTCCATCGCCTTCTTATCAGGCTCAATTCTAACGGGCTACTCTCCATCCTATCTAATCCTAATGATTGGAAACTTCATCTCCGGAATCGGTGCCGGTTTCACCCTCATCGTAGCTCCACTATACTGCGCTGAAATCTCACCACCTTCACACAGAGGCTCCCTCACCTCCCTCACAGAATTCTCCATCAACATTGGAATCTTACTTGGCTACATGTCAACCTTCTTCTTCGAGAAACTGCGTTTAAATCTCGGATGGAGAATGATGCTGGCGGTTCCTGCAGCTCCTTCAATTGCATTGATCTTTCTCATGTTGAAATTGGGAGAGTCACCAAGATGGTTAATCATGCAAGGACGTGTAGGTGATGCTAAGAAAGTGCTTTTACTAGTCTTCAACACAAAACAAGAAGCAGAACAGCGTTTGGCAGAAATAAAAACCGCGGTTGGAATCGAACCAAACAACACACAAGAAATTGTCCAAGTTCCTAAGAAAACTCGCCATGGTGGAGGAGCTCTTAAGGAATTGTTCTGTAAACCTACACCATTGGTGCGTAGGATAATGGTTGCAGCAGTTGGTCTTCACGTTTTCATGCACCTTGGTGGAATTGGAGTAATTTTATTATATAGTCCAAGAATCTTTGAAAAAACAGGAATCACAAGCAAGAGTAAGCTTTTACTATGCACAATTGGTATGGGAGTAATGAAACTTGTGTTTTCTTTCATTTCAATTTTTTTCATGGATGGAGTTGGGAGGAGGATTCTATTGTTGATAAGTTCTGGCGGTGTAACTGTGGCGATCTTAGGATTGGGGATTTGCTTGACCATGGTGGAGAAAGCTGTGGTGAATTTATTTTGGGCACCATGGTTTACCATTGTTGCTACTTATATCTATGTGGGTTTTATGTCTATTGGAATTGGGCCTGTCACATGGATTTATAGCTCTGAGATATTTCCAATAACGTTGAGAGCGCAGGGACTGGCGGTTTGTGTGGCGGTGAATAGGATTGTGAATATGGCAATGCTTACGAGTTTCATCTCGATTTATAAAGCGATAACGATGGGTGGGTGTTTGTTTGCACTTGCTGGTGTGAATGTTTTGGCTTTTTGGTTCTACTTTACCTTGCCAGAAACTAAAGGAAGATCTTTAGAGGACATGGAGATTGTGTTTGGGAAAGTTTCAAAAACTGAGGTGCAAACTAGTGAAGCCTAG 1524 0.4337 MSTQEKNNPHCKHPMENRSGENGETNRRLNLYACVSVMAASILSAFYGYEVGVMTGALLFIKEDLQISDLQLQFLVGIFHMCGLPASMAAGRISDYIGRRYTIILASIAFLSGSILTGYSPSYLILMIGNFISGIGAGFTLIVAPLYCAEISPPSHRGSLTSLTEFSINIGILLGYMSTFFFEKLRLNLGWRMMLAVPAAPSIALIFLMLKLGESPRWLIMQGRVGDAKKVLLLVFNTKQEAEQRLAEIKTAVGIEPNNTQEIVQVPKKTRHGGGALKELFCKPTPLVRRIMVAAVGLHVFMHLGGIGVILLYSPRIFEKTGITSKSKLLLCTIGMGVMKLVFSFISIFFMDGVGRRILLLISSGGVTVAILGLGICLTMVEKAVVNLFWAPWFTIVATYIYVGFMSIGIGPVTWIYSSEIFPITLRAQGLAVCVAVNRIVNMAMLTSFISIYKAITMGGCLFALAGVNVLAFWFYFTLPETKGRSLEDMEIVFGKVSKTEVQTSEA* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0440 507 MobiDBLite consensus disorder prediction 9 23 - -
Lja2g0440 507 PRINTS Sugar transporter signature 419 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0440 507 PRINTS Sugar transporter signature 127 146 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0440 507 PRINTS Sugar transporter signature 396 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0440 507 PRINTS Sugar transporter signature 44 54 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0440 507 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 489 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0440 507 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 24 499 IPR045262 GO:0015144
Lja2g0440 507 MobiDBLite consensus disorder prediction 1 23 - -
Lja2g0440 507 Pfam Sugar (and other) transporter 39 494 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja2g0440 507 ProSitePatterns Sugar transport proteins signature 2. 132 157 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja2g0440 507 SUPERFAMILY MFS general substrate transporter 16 491 IPR036259 -
Lja2g0440 507 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 24 499 - -
Lja2g0440 507 Gene3D MFS general substrate transporter like domains 25 498 IPR036259 -
Lja2g0440 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 484 IPR020846 GO:0022857
Lja2g0440 507 ProSitePatterns Sugar transport proteins signature 1. 347 364 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja2g0440 507 ProSitePatterns Sugar transport proteins signature 1. 90 107 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0440 Lja-Chr2 4039926 4042396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0440 22 496 Organic Solute Cotransporters AT4G36670 51.261 7.11e-174 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0440 - - lja:Lj2g3v1778740.1 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3234 4 60993971 60995993 Lja2g0440 2 4039926 4042396 PCT