Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0435 ATGGGATTAGGTGCAGCTGCGAGAAACGCGCGTCTCCTCCGAACCAGTCTCAGTCCCTCTCCATCATCTCAATACAGGAAACAGATTTCAGTCGCCAATCTCTTCCAGAGGTACGGTTTCCCCTCCACCCAGCTCCACTCCTTTCTCTCCGACAATCGCTTCCTCCTCGATTCCCATCTCCCCGACCTTCAGAAATCCCTCGATACTCTCTTTTCCTTCCGAATTCCACAGAAAACCCTCATTTCCCTCCTCCGCGATTGCCCCGGAGTATTGGAACACCGCTTCCTCCACAATTGGAAATCGGCTTTCTCGGAATTGAACTCTCTGGTTCCTAATTCATCCCCTTTGATGCTTGCCAACTTGCTGCAATGTTGTACAAGGTTCCAGATAGACCCAGTTGAGTTTTCGCACAGAGTTGAGGTTTTCAAGGGTTTAGGGTTTTCGGATGCCGCGGTAGCTAGGGTTTTGGAGGGGTTTACAGGTGTGATCGTGATGAGCGAGAGGGAAATCGTGTGTGTGATTGAGTTTCTTGTGGATTTTGGGGTGACAAGGGATGAGGTTGATCGGATTGTTCAATTGAATCCTAGGGTTTTGGGATTTGGGGTTGAGGATAGGTTGAAGCCGTTGATCGAGGAGTTGAGGGGTTTGGGATTTTCGCGCCGTGAGGTGAGGAAGGAGATAGTTAGGGAGCCAAGGATTCTGGGAATGGAAACAGGGGAGTTTTCGCGGTGTTTGAAGTTGTTAGAGAGTTTAAAATGCAGGGAAGCAATCAGAGAGAAGATTTTGGAGGAGGGTATGCTTAGGGCTTGTTTTGAAGTTAAACTTAGAGTGGATTGCTTGTGTGGTCATGGTTTGATTCGCAGGGATGCTTTGAAGGTGTTGTGGAAGGAACCGAGGTTGATCACTTATGATCTTGATGATATTGTGAAGAAGATTGAGTTCTTAGTGCATCGGATGAAATACGGTGTTGATTGTTTGCCTGATGTTCCTGAATACTTGGGTGTGAATTTTGATAAGCAGATTGTTCCTAGATACAATGTGGTAGAATATTTGAGAGCTAAAGGTGCCATTGGTTTTGAGGTTGGATTGAAGGACCTGATCAAGCCCACTAGGCTTAGATTTTACAATCTCTATGTCAAGCCGTATCCAGAGTGTGAGAAGATATACGGGAGATTTTCAAGAAATCTTGAAGTTAAAAGCAAGCATCCCGCTGGACTCTGGAAAATCTTTCAACCACAGAAGTTCCCTAGTACTGATGAAGATGTGAAGAACATGAAGTCTTTCATGGACTCAATGGTGTAG 1302 0.4593 MGLGAAARNARLLRTSLSPSPSSQYRKQISVANLFQRYGFPSTQLHSFLSDNRFLLDSHLPDLQKSLDTLFSFRIPQKTLISLLRDCPGVLEHRFLHNWKSAFSELNSLVPNSSPLMLANLLQCCTRFQIDPVEFSHRVEVFKGLGFSDAAVARVLEGFTGVIVMSEREIVCVIEFLVDFGVTRDEVDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFSRCLKLLESLKCREAIREKILEEGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYNVVEYLRAKGAIGFEVGLKDLIKPTRLRFYNLYVKPYPECEKIYGRFSRNLEVKSKHPAGLWKIFQPQKFPSTDEDVKNMKSFMDSMV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0435 433 PANTHER CGI-12 PROTEIN-RELATED 43 430 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 SMART mt_12 224 254 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 SMART mt_12 153 183 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 SMART mt_12 118 148 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 Pfam mTERF 275 367 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 Pfam mTERF 129 240 IPR003690 GO:0003690|GO:0006355
Lja2g0435 433 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 43 430 - -
Lja2g0435 433 Gene3D Transcription termination factor 3, mitochondrial 166 396 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lja2g0435 mTERF 6.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0435 - - cam:101513737 651.744