Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0420 ATGGCCGGCGGCGGTGGATCCACGGGGAGGTTACCGACGTGGAAGGAGAGGGAGAACAACAAGCGGAGAGAGAGACGACGGAGAGCGATTGCTGCTAAGATCTTCACTGGCCTTCGAGCTCAAGGGAACTTCAAGCTTCCCAAACACTGCGACAACAACGAGGTCTTGAAAGCTCTCTGTGCTGAAGCTGGTTGGATCGTCGAAGAAGATGGCACTACCTATCGAAAGGGATGCAGGAGACCCCCAATTGAGATTGGAGGTACACCACCGAATATGAGTGCTTGTTCTTCCATTCAGCCAAGTCCGCAATCCTCGTCGTTCCCTAGTCCTGTTCCGTCGTACCACGCCAGTCCAACCTCGTCGTCTTTCCCTAGTCCCACTCGCATGGATGCGAGCCCCTCTTCCTTTCTCCTCCCGTTTATTCGCAACATAACTTCCATCCCTACGAACCTTCCGCCTCTCAGGATATCTAATAGCGCCCCTGTAACCCCGCCTCTTTCTTCTCCCAGAAGTTCGAAGCGGAAAGCTGATTTTGAACCCTTCTCTAATGGCTCCTTCAATGCCTTCCGGCACCCCCTTTTTGCTACTTCTGCCCCGTCAAGCCCCTCACGCCGGCACCACGTGGCCACTTCCACTATTCCCGAATGCGATGAATCGGATGCTTCCACTGTGGACTCTGGTCGCTGGGTTAGTTTCCAGACAACACCAGCCTCTGCTGCTGCTGCTCCTCCTTCCCCGACATTTAATCTCGTGAAGCCAGCAATTCAGATGATCACTCCCCAAAGTTCCATGGATATGAATGAAGGCCTGCCATGGGGTTCTGGTGCAGAGATAGGTAGAGGATCAGATTTTGACTTTGAGAATGGCAGGGTGAAGCCGTGGGAGGGTGAGAGAATCCATGAAGTAGGAATGGAAGAGTTGGAGCTTACTTTAGGGTGTGGAAAAGCCTAA 951 0.531 MAGGGGSTGRLPTWKERENNKRRERRRRAIAAKIFTGLRAQGNFKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCRRPPIEIGGTPPNMSACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRMDASPSSFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSPRSSKRKADFEPFSNGSFNAFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSGRWVSFQTTPASAAAAPPSPTFNLVKPAIQMITPQSSMDMNEGLPWGSGAEIGRGSDFDFENGRVKPWEGERIHEVGMEELELTLGCGKA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0420 316 MobiDBLite consensus disorder prediction 151 176 - -
Lja2g0420 316 MobiDBLite consensus disorder prediction 90 128 - -
Lja2g0420 316 MobiDBLite consensus disorder prediction 151 170 - -
Lja2g0420 316 MobiDBLite consensus disorder prediction 1 25 - -
Lja2g0420 316 MobiDBLite consensus disorder prediction 197 224 - -
Lja2g0420 316 Pfam BES1/BZR1 plant transcription factor, N-terminal 8 131 IPR008540 -
Lja2g0420 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 315 - -
Lja2g0420 316 MobiDBLite consensus disorder prediction 78 128 - -
Lja2g0420 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 315 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0420 Lja-Chr2 3810629 3812702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0420 10 316 BZR Transcription Factor Family AT1G75080 58.824 1.66e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lja2g0420 BES1_N 1.6e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0420 K14503 - gmx:100812095 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0420 2 3810629 3812702 Lja2g0420 2 3810629 3812702 ECH