Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0383 ATGATAACATTGATCAGCTCAATCACCATCCAGAAATGTTTCATTTTGCTGATAATCTTTGTGGCGGCGTGTACAGCAAGAGTGCAAAACGTCACAAGAAACTACCAGAATCGTTGTGGAGGGGAAATTCTTCAGTACCCTTTTGGATTCTCTGAAGGGAGTGGAATCAAACTGAACTGTACTGAGAACAGAGTCCAAGTTGGTGGTTTTCAGGTTCAGAATGTTACCAGTGACAGCATATTCATCTATCTCCCTGCAAAATGCAACCGTAGTATGCTATCAATTTATCCACTTTTTGGTGGCAATTTTGCTCCTACACGGAACAATAGCTTTCTGGTGCAGGATTGTGAGGCGGCGATTGGTGGATGCGTTATCCCTGCTTCAAGTTTTCTGGGGAATCAGATTGAGGTGGAGAGCTGCGATAAAACAAGTGGGAATATCAGTTGCTTTATGAAGCAGAAGAAGCAAGAGAATGAAGGGGTGGTGGATTCTGATTTTTTGACATTTGATGAATTGAATGGAACTGGGTGTAGGTACTTGTTCTCAGCGGTGGCTTTTGGTCAGAGCAAGGAGATTACTGTGCAGTTTCAGGAGGTTGAGTTGGGGTGGTGGCTTCAAGGGCCTTGTCATTGCTCTGCTAACGCTACCTGCACAACCGTGAATCTCCAAAACGGGAGCTCCGGGTTCCGGTGCCGGTGTAACGATGGCTTCCAGGGAGATGGCTTTGCCAATGGCGCCGGTTGCTGGAAAGCTCCAAGTTGCAGTGCGTCAACACTAACATCTGGAGGGTGTGGGAGTGCAACCAAAATTGGTGTTATTGTTGCAGTGATCGTGACTGTAGCTTTGGTCGTGGTTGCTCTCTTGGTTCTATGCTATTGTGTCAGGCGCCGTTCATGGTTGGGAAAGAATACAAGAGTAAAGCGCTTGTTACGTGAAGCTGCAGGAAGCTTTAGCGTGCCTTTCTACCCTTACAAAGAGATAGAGAAAGCCACAAATTCTTTCTCTGATAAACAAAGGTTAGGGACTGGGGCTTTTGGTACAGTTTATGCTGGAAAGCTTCACGATGATGAGTGGGTTGCTATCAAGAAGATAAGGCATAGAGACATCGACAGCATTGACAAAGTCATGAATGAGATCAAGCTACTTTCATCCGTGAGTCACCCAAATTTAGTTCGCCTCCTGGGTTGCTGCATAGAAGAGGGAGAGCACTCAGAGCAGATACTTGTTTATGAATACATGCCTAATGGAACACTGTCTCAGCATTTGCAAAGAGAGAGGGGTGAAGGTCTTCCATGGACAGTAAGACTTACCATTGCTTCTGAAACTGCCAATGCTATAGCATATCTCCATTCTGCAATTCATCCCCCAATTTACCACAGAGACATAAAATCTAGTAACATACTCTTGGATTATAGCTTCAAATCTAAAGTAGCTGATTTTGGGCTTTCTAGGCTAGGCATGACAGAAACATCGCACATCTCAACCGCTCCGCAAGGGACTCCGGGTTATGTCGACCCCCAGTACCACCAGAACTTTCACCTTTCTGATAAAAGTGATGTCTACAGCTTCGGAGTAGTTTTGGTAGAGATAATAACTGCGATGAAAGTGGTTGATTTTGCCCGACCTCAGACTGAGATTAACTTAGCTGCACTAGCTGTTGACAGGATCCGGAGGGGCTCTATAGATGAGATTGTAGATCCTTTCCTTGAACCTAATAGGGATGCTTGGACACTATACTCCATTCATAAGGCGGCTGAACTTGCATTTAGATGTCTTGCTTTTCATAGTGACATGAGGCCAACTATGATGGAAGTGGCTGAGGAGCTAGAACACATCAGACGCAGTGGATGGGCGACCATGGAGGAAACCATAGGCATGGCTTCGTCGGTCGGGTCTGCGTGTTCATCGCCTCGCAATGGAAGTGAGAAATCAGTGAATAGTGTTAAGAAAGTGGGGCAGGAGAGTGAGGGATTGATTGTTCCGCCGAAGGACGAGAGCTATTTGCAATCTATGGAGGTGAAGGACAGCTCCCCGGTATCGGTGCATGATCCTTGGTCAAGTGGACACAGCTCACCTTCATCAAACAGCTTGCTCGAAAATGTCGTACGGTGA 2112 0.4612 MITLISSITIQKCFILLIIFVAACTARVQNVTRNYQNRCGGEILQYPFGFSEGSGIKLNCTENRVQVGGFQVQNVTSDSIFIYLPAKCNRSMLSIYPLFGGNFAPTRNNSFLVQDCEAAIGGCVIPASSFLGNQIEVESCDKTSGNISCFMKQKKQENEGVVDSDFLTFDELNGTGCRYLFSAVAFGQSKEITVQFQEVELGWWLQGPCHCSANATCTTVNLQNGSSGFRCRCNDGFQGDGFANGAGCWKAPSCSASTLTSGGCGSATKIGVIVAVIVTVALVVVALLVLCYCVRRRSWLGKNTRVKRLLREAAGSFSVPFYPYKEIEKATNSFSDKQRLGTGAFGTVYAGKLHDDEWVAIKKIRHRDIDSIDKVMNEIKLLSSVSHPNLVRLLGCCIEEGEHSEQILVYEYMPNGTLSQHLQRERGEGLPWTVRLTIASETANAIAYLHSAIHPPIYHRDIKSSNILLDYSFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARPQTEINLAALAVDRIRRGSIDEIVDPFLEPNRDAWTLYSIHKAAELAFRCLAFHSDMRPTMMEVAEELEHIRRSGWATMEETIGMASSVGSACSSPRNGSEKSVNSVKKVGQESEGLIVPPKDESYLQSMEVKDSSPVSVHDPWSSGHSSPSSNSLLENVVR* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0383 703 Pfam Protein kinase domain 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0383 703 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Lja2g0383 703 Gene3D Laminin 203 244 - -
Lja2g0383 703 ProSiteProfiles Protein kinase domain profile. 334 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0383 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Lja2g0383 703 Gene3D Transferase(Phosphotransferase) domain 1 413 628 - -
Lja2g0383 703 SMART serkin_6 334 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0383 703 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 678 - -
Lja2g0383 703 MobiDBLite consensus disorder prediction 628 651 - -
Lja2g0383 703 MobiDBLite consensus disorder prediction 671 703 - -
Lja2g0383 703 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
Lja2g0383 703 MobiDBLite consensus disorder prediction 628 703 - -
Lja2g0383 703 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 678 IPR045274 GO:0007166
Lja2g0383 703 SUPERFAMILY Protein kinase-like (PK-like) 313 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0383 Lja-Chr2 3488217 3492870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0383 14 703 Receptor kinase-like Gene Family AT2G23450 57.204 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lja2g0383 Pkinase 9.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0383 - - gmx:100779130 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0383 2 3488217 3492870 Lja4g3279 4 61864172 61867873 PCT