Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0377 ATGTCGTTTTCGTTGTTCTCCACTCCTCAGCAGCAACAACAACCGCAGCAGCAGCAGCAGTTGTTTCAACCACAACAGCAATCTCCATTCCAGCAGAACAGTCTATTCAATTCACAGCAACAGCAATTTCAACAGCAACAACAGCAGCAGCAGCAGCAACATCAGTTATTCTTGTTCACGAACGATAGAACTCTGGCCAGTTACGGCACCAATTGGTCGGATCTACATCCCGATTCTCAGAAGATTCTTCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTACGATTCTTCAGTTTCCAATGATGGATTTGAAGTTGATGCATGCCACATTGTTCAGGAACTTGGTGGAATTAGCACTGCTATGGAACGGCAGAAAGCTTTGCTGCAGGAACTGATGTCAGTTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTTCATCCCAGTGGGGGTTCATCAAGTGCCACTGCCCCATCACAGGCTCCTGGAGTAACTACAACACCTAGTTCAAGCAGCCAACCAACAAGTACATCTATGGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCTCCCTTTTTGCAGCAGACAGTTTTAAGATTTGAGAAGTATCTTGGGGAATGCCATCAGTGGGTTGAAGAGTTGGAGCAATTGCTGCTCTTAGATTCTGAGAGAAACACGTCCAGTAATGGATCCTCATTATTGCAGTCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTTCAAAGGTCGAGGGCATTCACCAGTACATTGAATCTATGAAATCAGCATACCTTGCTGATCAGCGCCGCCGGGGAGAGGTCAATGATCCATTTCTTGAAGCTGATCGTCGAGAAACTGCAAGACAAGAAGCTGCCTCGAAAAGAGTCCATCCAACGTTGCATTTGCCTGCAAATTCACAACCCTCTACTCAAGTTGCTGGGTTGTTTTCTAGTTCAGGAACGCAAGGGTTATTGAATGCCCCACAGACATCTGCAGCACCTTCATCTTCATCATCAGGAAGTGGTTTCTCTCTTTTTAACACAACATCTTCAGCTCCATCGTCTTCTATGCCATCTTCTTTGTTTGCAACACCAAGTACTCCTGCTCCTGGGTCCTCTTGGTTTGCATCCTCAAGTACTACTCCTCAATCCTCACTTTTTGGTTCTGCATCCTCATCCTTTCTGGGTTCGGCATCAACCCCCTCTCTCTTCGGTAATACTGCACCTTTGCTTAATACACCGCCAGCTACAAGTTCCTTCTTCTCAAATCCATTTCCTTCAGGTGCTGCAACAGGATCGGGGGCAAGCTTTGGGGGACAGAAAAATCCACGGCCAAAAGGGAGAGTTAGTACTCGGCGCTAG 1458 0.4602 MSFSLFSTPQQQQQPQQQQQLFQPQQQSPFQQNSLFNSQQQQFQQQQQQQQQQHQLFLFTNDRTLASYGTNWSDLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFEVDACHIVQELGGISTAMERQKALLQELMSVVKDMLRNTEVAVRSFMMLRPRFHPSGGSSSATAPSQAPGVTTTPSSSSQPTSTSMVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWVEELEQLLLLDSERNTSSNGSSLLQSLPKVMTNVHDFFVHVASKVEGIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGLLNAPQTSAAPSSSSSGSGFSLFNTTSSAPSSSMPSSLFATPSTPAPGSSWFASSSTTPQSSLFGSASSSFLGSASTPSLFGNTAPLLNTPPATSSFFSNPFPSGAATGSGASFGGQKNPRPKGRVSTRR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0377 485 MobiDBLite consensus disorder prediction 308 327 - -
Lja2g0377 485 MobiDBLite consensus disorder prediction 447 470 - -
Lja2g0377 485 MobiDBLite consensus disorder prediction 332 410 - -
Lja2g0377 485 MobiDBLite consensus disorder prediction 172 199 - -
Lja2g0377 485 Gene3D - 215 305 - -
Lja2g0377 485 PANTHER NUCLEOPORIN P58/P45 5 472 - -
Lja2g0377 485 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 472 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Lja2g0377 485 Coils Coil 134 154 - -
Lja2g0377 485 MobiDBLite consensus disorder prediction 308 410 - -
Lja2g0377 485 MobiDBLite consensus disorder prediction 170 199 - -
Lja2g0377 485 MobiDBLite consensus disorder prediction 1 34 - -
Lja2g0377 485 MobiDBLite consensus disorder prediction 447 485 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0377 56 484 NAC Transcription Factor Family AT4G37130 64.384 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0377 K14307 - gmx:100776992 628.632