Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0369 ATGGATCGGGCGTCGGCGACGGCTACCATGGATATGCCGATCATGCACGACAGCGACCGGTACGATTTCGTCCGCGATATCGGGTCAGGGAACTTCGGCGTCGCCAGGCTCATGAGGGATAAGCACACCAAAGAGCTCGTTGCTGTCAAGTACATCGAACGCGGAGATAAGATTGATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTCAGGCATCCTAACATTGTCAGGTTTAAGGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAAAATCCACAGTGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATTCAATGCAAATTTGTCACCGGGATCTGAAGTTGGAAAACACTTTGTTGGATGGAAGTCCAGCACTTCATTTGAAGATATGCGATTTTGGATACTCCAAGTCTTCTGTGCTTCATTCTCAACCAAAGTCAACTGTGGGAACTCCAGCATATATTGCTCCAGAAGTACTGCTGAAGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGTGTAACCTTATATGTAATGCTAGTGGGAACATATCCTTTTGAAGATCCAGATGATCCAAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCACTGTCCAGTATTCCATTCCAGACTTTGTTCAAGTGTCTCCTGAGTGCCGCCACCTTATCTCTAGGATCTTTGTTTTTGATCCTGCAGAGAGAATCACCATTCCTGAAATACTGAAAAATGAATGGTTTCTGAAGAATCTTCCTGCTGATCAAAAGATAATGAGTAACCAATTCGAAGAGCCAGACCAGCCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACTATACCAGCAGCTGGGTCTTATTCTTTAGATCAGTTTATGGCTGATAACCTTGATATGGATGATGGCATGGATGACTTAGACTCCGACTTTGAACTTGATTGTGATAGTAGTGGGGAGATAGTGTATGCCATATAA 1074 0.4367 MDRASATATMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFEKIHSAGRFTEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGTYPFEDPDDPKDFRKTIQRVLTVQYSIPDFVQVSPECRHLISRIFVFDPAERITIPEILKNEWFLKNLPADQKIMSNQFEEPDQPMQSIDTIMQIISEATIPAAGSYSLDQFMADNLDMDDGMDDLDSDFELDCDSSGEIVYAI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0369 357 PANTHER SERINE/THREONINE KINASE 13 351 - -
Lja2g0369 357 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Lja2g0369 357 Gene3D Transferase(Phosphotransferase) domain 1 97 284 - -
Lja2g0369 357 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Lja2g0369 357 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 13 351 - -
Lja2g0369 357 SUPERFAMILY Protein kinase-like (PK-like) 19 312 IPR011009 -
Lja2g0369 357 ProSiteProfiles Protein kinase domain profile. 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0369 357 SMART serkin_6 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0369 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lja2g0369 357 Pfam Protein kinase domain 21 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0369 Lja-Chr2 3417383 3423156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0369 20 287 CBL-interacting serine-threonine protein kinases AT5G25110 44.326 1.12e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lja2g0369 Pkinase 3.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0369 K14498 - gmx:100783967 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0369 2 3417383 3423156 Lja4g3682 4 68695756 68698936 PCT
Lja4g3308 4 62422891 62427529 Lja2g0369 2 3417383 3423156 PCT