Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0362 ATGCGCTGGTTGTCCACCTTCGCTTCCTCCTCCTCCACCGCCACTTCTTCATCATCTTCTTCCTCTTCCTCTTCTCCGACGACTCTAAAATCCTCCCCTTCCACCTCCGTCTCCAAGAACACCCGCGGCACCTGGCTTTTCGGGAGTGGCAAAAAGTCCACACGCGCCAGGAAGCTCCGCCACGTCGTTACAGAAGATGATACCTCCGTCTACGAGGCCGTCGCTGTGGCGCCTTTCTCTCGTTCTCCCAGCGCCCGTAGCTACCTTCGCTCCAACACCAGCTCCTCCGTCGCGCCTCAGCCATTGCCCTTGCCGGAGCTTCCATCTCCCTCCCAGCTTCGTCAGAAAGACGCTTCCGACTGCCGGTTGCCCTCTCCCAGAGACACCACCTCCGCCCCCTCCTGCAGAAGCCAAGAACATGAAGCCCCTATCGAGCCAGTCAGCATTGTCACCACTGGCTTTCGGATGCGCAGTGTTTTTGCAAGCCAAGAGACAAGAAAGAATTCGGAGCACATGGAGATGAGGTCCCCCGGGACTGGTGGTTGTGCTTCTACAACTGCAAGCACTCGAGGAAATAACAACTTCTCCATTAGTGTCCCCTCGAGGAGTGCTCATAGCAGTCCCTTTGCTAGCCCCACAATCAGCCCAAAGAATACCAGCCATGATGATTTTATACCATATTATTATGTATCACCCAAAGGAAGTCAGTTCTGGTCTGCACCAGAGATGCCCACATCTGAAGCTCACCCACCTCCAGCTTTCTTTGATTTATCAGCACTAGGTACTGATAATAATGCTACTTCTCCCCATCAAAGAAGTCCCCGGCAACAACACATCACTTCGCCGCTACCCAGGTTATCCCATGACACCGCAACAGCACGCCGTGAAAGTATTGCTCCCCTCACTGTTCACCCTTTACCCTTGCCTCCTTGGGCTGGGACATCCTTGCCTTCACCCTCTGCAACCTTTTCACAACCTGTGGCCATGGCCAGGACAGAATCCTTGTCTATGACAAGCCAATGGCAAAAGGGGAAACTTATTGGGAGAGGTACCTTTGGAAGTGTTTATGTTGCCACCAATAGAGAAACTGGAGCATTGTGTGCAATGAAAGAGGCAGAAATATTTTCTGATGATCCAAAATCTGCCGAGTGTATAAAGCAGTTAGAGCAGGAAATTAACGTTCTTAGCCATCTGAAACATCCGAACATTGTGCAGTATTTTGGTAGTGAAATAGTAGAAGACAAGTTTTATATTTATTTGGAATATGTCCATCCCGGTTCAATAAATAAATACGTTCGCGAACATTGTGGTGCGATAACAGAATCTGTTGTTCGGAATTTCACGCGCCATATTCTTTCAGGATTGGCTTACTTGCATAGTAAAAAAACAATTCACAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCATCTAACTGGACATTCTGCTGATCTTTCTTTGAAGGGAAGTCCATACTGGATGGCCCCAGAGCTTATGCAAGTAGTTATGCAAAAAGATAACAGCTCTGAACTAGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACGGGGAAGCCTCCTTGGAGTGAGTACGAAGGAGCCGCAGCTATGTTTAAGGTTATGAAGGATACCCCTCACATACCTGAAACATTATCACCTGAGGGTAAAGATTTCCTGAGGCTCTGCTTCAAAAGAAATCCAGCAGAGAGACCAACTGCTTCCATGTTGCTAGAGCATAGATTTCTGAGAAACTTACAACAGCCAGATATTTCATCTTCCTCCCAGCTGCATAACGGAATATCCTCAATGGATTCCCACAGCCCCAGAGGGTTATCAGAAAATCCCAACACACAGATTGGGAAAGGGAAATCAACCGCTGAGAGCAGCATCGCAGTTCCCTATTCTCTCTACTCTTCCCAGCTCTTGTAG 1989 0.4832 MRWLSTFASSSSTATSSSSSSSSSSPTTLKSSPSTSVSKNTRGTWLFGSGKKSTRARKLRHVVTEDDTSVYEAVAVAPFSRSPSARSYLRSNTSSSVAPQPLPLPELPSPSQLRQKDASDCRLPSPRDTTSAPSCRSQEHEAPIEPVSIVTTGFRMRSVFASQETRKNSEHMEMRSPGTGGCASTTASTRGNNNFSISVPSRSAHSSPFASPTISPKNTSHDDFIPYYYVSPKGSQFWSAPEMPTSEAHPPPAFFDLSALGTDNNATSPHQRSPRQQHITSPLPRLSHDTATARRESIAPLTVHPLPLPPWAGTSLPSPSATFSQPVAMARTESLSMTSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEAEIFSDDPKSAECIKQLEQEINVLSHLKHPNIVQYFGSEIVEDKFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQVVMQKDNSSELAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPHIPETLSPEGKDFLRLCFKRNPAERPTASMLLEHRFLRNLQQPDISSSSQLHNGISSMDSHSPRGLSENPNTQIGKGKSTAESSIAVPYSLYSSQLL* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0362 662 MobiDBLite consensus disorder prediction 84 100 - -
Lja2g0362 662 Gene3D Transferase(Phosphotransferase) domain 1 337 635 - -
Lja2g0362 662 Pfam Protein kinase domain 342 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0362 662 MobiDBLite consensus disorder prediction 162 217 - -
Lja2g0362 662 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 649 - -
Lja2g0362 662 MobiDBLite consensus disorder prediction 240 290 - -
Lja2g0362 662 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Lja2g0362 662 MobiDBLite consensus disorder prediction 260 287 - -
Lja2g0362 662 MobiDBLite consensus disorder prediction 82 143 - -
Lja2g0362 662 MobiDBLite consensus disorder prediction 112 137 - -
Lja2g0362 662 MobiDBLite consensus disorder prediction 1 48 - -
Lja2g0362 662 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 649 - -
Lja2g0362 662 MobiDBLite consensus disorder prediction 179 217 - -
Lja2g0362 662 MobiDBLite consensus disorder prediction 612 645 - -
Lja2g0362 662 SUPERFAMILY Protein kinase-like (PK-like) 326 625 IPR011009 -
Lja2g0362 662 ProSiteProfiles Protein kinase domain profile. 341 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0362 662 SMART serkin_6 341 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0362 662 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0362 Lja-Chr2 3342217 3346565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0362 42 641 MAP Kinase Kinase Kinase AT5G66850 54.717 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lja2g0362 Pkinase 3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0362 - - cam:101502514 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0362 2 3342217 3346565 Lja4g3313 4 62589730 62594378 PCT