Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0346 ATGGAGATGGCACAGAACGGTGTCAGGACACGAGCTCAAGCCGCATTAGCCATGGAAGAAGAAGAAGAAGAAGCTACCAGTTCACCTGCACAAACACAAACACCAAAGAGAAGGAAGATCAACAACAACACCACCACCAAACCAGAACGAGAATTCCCTCACCACAAGGCTCAGACTCCGACGGCGGAACGGCCTACCTCCGATGACTTACCGGCTGCCTCTTGCTGTTCCAGCAACGGATCCGATGAGGAAACGAACGATCTGGAGGTTGAGAGCGCGCAAGTTGAAACGTCGACGTGCAATTGCGGTGAACAACAAGAAGAAGAAGAAACTCACAGGAGAGAGATGAGCCACTCGAGCAAGAACGGAGGGAATTCTCAGGAGATGGAGTCAATGGAGGCCAATTCTCACCGTCCTTCATCAACAGCAGCGATCAGAAAGCCAACGGAATCGGAGCTCGATGAATTCTTCTCCGCCCATGAGAAAGATATTCAGCAGCGTTTTCAAGACAAGTATAATTTTGATATCGTGAAGGATGTGCCATTGGAAGGACGCTACGAGTGGGTTCAGTTTAAGCCATGA 582 0.4983 MEMAQNGVRTRAQAALAMEEEEEEATSSPAQTQTPKRRKINNNTTTKPEREFPHHKAQTPTAERPTSDDLPAASCCSSNGSDEETNDLEVESAQVETSTCNCGEQQEEEETHRREMSHSSKNGGNSQEMESMEANSHRPSSTAAIRKPTESELDEFFSAHEKDIQQRFQDKYNFDIVKDVPLEGRYEWVQFKP* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0346 193 MobiDBLite consensus disorder prediction 105 119 - -
Lja2g0346 193 MobiDBLite consensus disorder prediction 120 147 - -
Lja2g0346 193 MobiDBLite consensus disorder prediction 27 41 - -
Lja2g0346 193 PIRSF CKI_KRP_plant 3 193 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lja2g0346 193 MobiDBLite consensus disorder prediction 1 154 - -
Lja2g0346 193 Pfam Cyclin-dependent kinase inhibitor 148 190 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lja2g0346 193 Gene3D p27 145 193 IPR044898 -
Lja2g0346 193 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 4 193 - -
Lja2g0346 193 MobiDBLite consensus disorder prediction 42 62 - -
Lja2g0346 193 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 4 193 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0346 Lja-Chr2 3159926 3162094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0346 112 193 Core Cell Cycle Gene Families AT1G49620 45.349 7.62e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0346 - - adu:107487785 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0346 2 3159926 3162094 Lja4g3332 4 63028419 63030125 ECH
Lja2g0346 2 3159926 3162094 Lja2g0346 2 3159926 3162094 ECH
Lja2g0346 2 3159926 3162094 Lja4g3332 4 63028419 63030125 PCT