Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0343 ATGGGAATAATGGACACCATCGACGCTTCGTCTCCACCGTCTCAGAGCGGTCACTCACGCCATTTCTACCTCGCAGTAGACAGGCTTCAAGTCAAAATGCAAACTCTGGTTGATCTTCTCGATTTGGTGGGTCGACGATCATGCTTGCCAATCGTTATCTGTTGCAGCACCCGCGACGACCTTGATTCTCTCTTCTCATCTCTTTCTGCTCTCCCCTTCATTTCCTCTTCTGCATTGTACAGTGACCTTGCTGAAGGTGAACGCGCTTCAATTTTAGACAAATTCCGGCAAGTCACAGCAAAGTGGAACCAGATTAATCATGCTGGAGCAGGGAATGAGGATGATGATGATGAGGCAGGGAAAGTTGACAGGTCTCACATGATTATTGTAACAGATGCTTGCCTTCCCTTTCTTGCTTCTGGAGAGCCTCCCTTGAATGGTCATCTTCTCATTAACTACGAGTTGCCGGCAAAGAAGGAAACATATGGAAGGCGTTTGGCAGCTTGTTTAACCGCTGATGGAATAGTCATCAATATGGTTGTTGGTGGGGAAGTAGTGACTCTAAAAAGTATTGAAGAAAGCACTGGTATTCTCATGCCAGAAATGCCAATGCAAATTCTTGACATTTTATGA 633 0.4566 MGIMDTIDASSPPSQSGHSRHFYLAVDRLQVKMQTLVDLLDLVGRRSCLPIVICCSTRDDLDSLFSSLSALPFISSSALYSDLAEGERASILDKFRQVTAKWNQINHAGAGNEDDDDEAGKVDRSHMIIVTDACLPFLASGEPPLNGHLLINYELPAKKETYGRRLAACLTADGIVINMVVGGEVVTLKSIEESTGILMPEMPMQILDIL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0343 210 Gene3D - 15 210 IPR027417 -
Lja2g0343 210 PANTHER RNA HELICASE 6 207 - -
Lja2g0343 210 PANTHER INITIATION FACTOR 4A-LIKE PROTEIN 6 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0343 Lja-Chr2 3130616 3133119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0343 20 210 Eukaryotic Initiation Factors Gene Family AT3G19760 26.943 3.28e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0343 - K03257 gmx:100791017 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0343 2 3130616 3133119 Lja2g0343 2 3130616 3133119 ECH