Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0329 ATGAAGGGGTTACATAGTGGCATTCGTATCTGGTTGATTGCTATATTATGCCTGTTCACCTGTTCTTCCAGCTCCAAGATCGGAGAAACTTGCGGGTCATGCGATGGTGGTCTTACCTGTCAGACATGCCCTGCAAATGGGAATACCAGACCCAGATGTTCACGGATTCAACCTTCAAACCCCACTACCAAAGTGAAGGGGCTTCCATTTAACCGGTATTCATGGCTCACGTCTCACAACTCGTTTGCTCAGGCCGGAGCGAGATCGGCCACCGGGTCTTTCATTATAGCTCCGATGAACCAGGATGACACTGTTGCTCAGCAACTCAAAAATGGCGTTCGAGGATTCATGCTAGATATGTATGATTTTCAAAACGACATCTGGCTGTGTCACTCATACAAAGGTCAATGTTTCAACTTCACTTCATTCCAACCTGCCAAAAACGTGCTTCATGACATGCGTTCATTTCTGGATTCAAACCCGTCTGAAATCATCACCATCTTCATAGAGGACTATGTTAATACTCCTAAGGGCCTAACTAAGGTCTTCCAAGCTTCAGGACTCAGCAAGTACATGTTGCCACTGTCCAGGATGCCTAAGAATGGTGAAGATTGGCCAACCGTGGATGACATGGTCCAGAAGAATCAGCGCTTGGTCGTTTTCACTTCCAAATCATCCAAGGAACAATCTGAGGGCATTGCTTTCCAGTGGAAGTATGTGGTAGAAAACCAATATGGAGATGAAGGCATGCAAGCTGGTTCTTGTCCGCCTCGCGCAGAATCAGCACCAATGAACACAAAATCTAGGTCACTGGTTCTGGTCAACTACTTTCATTCTACACCAAATCGAACTCTGTCGTGTGCTGACAATTCGGCTCCATTAATTAGCATGATGAAGACTTGCCAAGAAGCATCTGGTGGCAACCGGTGGCCAAATTTCATCGCTGTTGATTATTACCAGAGGAGTGATGGCGGAGGAGCACCAGAAGCTGTTGATGTAGCAAGTGGTCATCTCGCTTGCGGGTGTGACAACATTGCTTATTGCAAGGGAAACGGTACGTTTGGGAGTTGTGATGTTCCTCCTATTTCACCACCCCCACCAGCTTCAGAAGCCACTCCCAACGTAAACCAGCAAAATAATAATCAAGCAAGCAATGCTTATATTGGGAGAACAGCCAAGCTGATGCAACCAGTTGTGTTAATTTTGGTTACTACAATGTTCTTGGCATGTTTATAG 1236 0.4604 MKGLHSGIRIWLIAILCLFTCSSSSKIGETCGSCDGGLTCQTCPANGNTRPRCSRIQPSNPTTKVKGLPFNRYSWLTSHNSFAQAGARSATGSFIIAPMNQDDTVAQQLKNGVRGFMLDMYDFQNDIWLCHSYKGQCFNFTSFQPAKNVLHDMRSFLDSNPSEIITIFIEDYVNTPKGLTKVFQASGLSKYMLPLSRMPKNGEDWPTVDDMVQKNQRLVVFTSKSSKEQSEGIAFQWKYVVENQYGDEGMQAGSCPPRAESAPMNTKSRSLVLVNYFHSTPNRTLSCADNSAPLISMMKTCQEASGGNRWPNFIAVDYYQRSDGGGAPEAVDVASGHLACGCDNIAYCKGNGTFGSCDVPPISPPPPASEATPNVNQQNNNQASNAYIGRTAKLMQPVVLILVTTMFLACL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0329 411 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 69 177 - -
Lja2g0329 411 PANTHER PLC-LIKE PHOSPHODIESTERASES SUPERFAMILY PROTEIN 10 378 - -
Lja2g0329 411 CDD PI-PLCc_At5g67130_like 60 332 - -
Lja2g0329 411 Gene3D Phosphatidylinositol (PI) phosphodiesterase 58 325 IPR017946 GO:0006629|GO:0008081
Lja2g0329 411 SUPERFAMILY PLC-like phosphodiesterases 65 336 IPR017946 GO:0006629|GO:0008081
Lja2g0329 411 PANTHER UNCHARACTERIZED 10 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0329 Lja-Chr2 2965004 2969663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0329 - - gsj:114421770 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0329 2 2965004 2969663 Lja4g0702 4 5807860 5809822 ECH
Lja5g3211 5 62184129 62188030 Lja2g0329 2 2965004 2969663 ECH
Lja2g0329 2 2965004 2969663 Lja2g0329 2 2965004 2969663 ECH