Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0328 ATGCCCGATCAATATCATAATCCACCTTCTACCAGCTCCGCCACAATGAACGACCAACTCTCCAACACCACCTCCATCTTCGGCCTCCGCTTATGGGTTGTCCTCGGCGTCTGTGTCGGCGCCGCCATCGTCCTCATCCTCTTCCTCATCTCCATCTGGCTCGCCTTCAAACGCTCCAAGTCAAAACACTCCATCCCCGACGTCTCCAAGGAGATCCAAGAAATCAGAATCGACAACAGCACCACCACAACCCACCACCACCAACCCGACCCTACACCAGAACCCGACCCGGTTCCGTCGAACGAGCTTGAAGAAGACAACCTCCTCGGCGGGTACAGCAGAATTCAGTTTGAAATTGGGAAGAACCATCGAATTTCGTACCCTGAACGCGCCTGCGCTGTCAGGTCCTCTAACTCCCGGGAACACAGTGGGGAAGCTCGGCCAGTTGATCAAGTCCCCACCGTGATTCCTCAAGTTTCTCACCTGGGTTGGGGCCACTGGTACACTCTCAGGGAGCTTGAGGATGCTACCAATGGGTTTGCCCCTGATAAGGTTATTGGTGAAGGTGGCTATGGAATTGTTTATCATGGTATCTTGGAGGACAACACTAATATTGCAATTAAGAATTTGCTCAATAACAGGGGACAAGCTGAGAGAGAATTTAAGGTTGAAGTGGAAGCTATAGGACGAGTTCGCCACAAGAATTTGGTGAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCACAGAATGCTTGTGTATGAGTATGTTGACAATGGTAACTTGGAACAATGGATTCATGGGGATGTTGGGCCTTGTAGTCCTCTAACTTGGGATATTCGAATGAACATTATTCTGGGAACGGCTAAAGGGTTAACTTATCTTCATGAGGGGCTAGAACCAAAAGTTGTTCACCGCGATATTAAATCAAGCAACATTTTGCTTAGTAAGCAGTGGCATTCAAAGGTGTCAGATTTTGGCCTTGCCAAACTCCTTGGCCCTGAGAGCAGTTATATCACAACCCGAGTCATGGGAACATTTGGTTATGTAGCTCCTGAATATGCTAGTACTGGTATGTTAAATGAACGGAGTGATGTGTATAGTTTTGGAATTCTTATTATGGAAGTAATTACAGGCAGGAATCCAGTTGATTATAGTCGGCCTCCAGATGAGGTTAATTTAGTTGACTGGCTCAAGAAGATGGTCAGCAACAGAAATCCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAACTTCGAGGGCACTAAAGCGAGCCCTTCTTGTGGCCTTACGCTGCACGGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTTATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGCAGGGCTAGAAGGGATACAGTACAATCACCTAACATTAGAGTGGAGGATGGACTGAAAGGGGAGGTGACTGTATCAGTTGATGATGATAAATGTGAAAATGGGATGTCCCCCAATGAGACAAGATTAAGCCATCAAATAGAAAAGCAATAA 1536 0.4727 MPDQYHNPPSTSSATMNDQLSNTTSIFGLRLWVVLGVCVGAAIVLILFLISIWLAFKRSKSKHSIPDVSKEIQEIRIDNSTTTTHHHQPDPTPEPDPVPSNELEEDNLLGGYSRIQFEIGKNHRISYPERACAVRSSNSREHSGEARPVDQVPTVIPQVSHLGWGHWYTLRELEDATNGFAPDKVIGEGGYGIVYHGILEDNTNIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWIHGDVGPCSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWHSKVSDFGLAKLLGPESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPDEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARRDTVQSPNIRVEDGLKGEVTVSVDDDKCENGMSPNETRLSHQIEKQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0328 511 Gene3D Phosphorylase Kinase; domain 1 156 255 - -
Lja2g0328 511 ProSitePatterns Protein kinases ATP-binding region signature. 186 208 IPR017441 GO:0005524
Lja2g0328 511 MobiDBLite consensus disorder prediction 482 497 - -
Lja2g0328 511 Gene3D Transferase(Phosphotransferase) domain 1 256 475 - -
Lja2g0328 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Lja2g0328 511 ProSiteProfiles Protein kinase domain profile. 180 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0328 511 SUPERFAMILY Protein kinase-like (PK-like) 164 453 IPR011009 -
Lja2g0328 511 CDD STKc_IRAK 186 452 - -
Lja2g0328 511 MobiDBLite consensus disorder prediction 457 472 - -
Lja2g0328 511 MobiDBLite consensus disorder prediction 80 105 - -
Lja2g0328 511 PANTHER OS01G0323000 PROTEIN 12 502 - -
Lja2g0328 511 PANTHER RECEPTOR-LIKE KINASE PLANT 12 502 - -
Lja2g0328 511 SMART serkin_6 180 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0328 511 Pfam Protein kinase domain 183 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g0328 511 MobiDBLite consensus disorder prediction 457 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0328 Lja-Chr2 2961157 2964435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0328 161 498 Receptor kinase-like Gene Family AT4G02010 42.000 3.32e-86 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lja2g0328 Pkinase 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0328 - - gmx:100797440 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0328 2 2961157 2964435 Lja2g0328 2 2961157 2964435 ECH