Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0322 ATGTCAATGGCGTCGAAGCCTCCGCCTCCGCCGGCGCCGTCTCCTCCGCCGTCGTCTTCTAAATCAGCTCCTCCCGTCGATCCCTCCACAAAGAAAGTGGACGACGCACGTCCTGCTGTGAACGATGTGTTGCTGGTTATTGATTCTCTCAAGAAACAAGTTGCGGCTGAACGGGTTGTTTCGGTTAAGAAAAAAATGGAAGAAAATAGACTGAAGCTGGTTGGTGTCACGGACCATCTCTACAAAATGTCGATGGAGAGAAGGACCGGCGGCATTGCCGATATGAATGGAAGTCTGGACCTGCTGTCTAAGAGGCAAAAGGGTGCAACTGATATGCACAATGGCGTTAATGCGAGTAATGGTGACAGGGAGAGCAATGGTTATCATGAAGATGGCCACGGCTCTACAGCAGTTCTTCTAGGATATAATGTTACTACAAAGAATGCTGTTCGTCCTATCAAGTTACCTGAAGTAAAAAGATTACCTCCTTACACTACGTGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAATCAGTTGTAGGCCGGAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTCATTTGTAGTGACAGTGAAGAGGAAATAATAGATGATGAAGAGGACAAAAGAGAATTTGTAGAGTCAGAAGATTTTATACTTCGCATGACTATCAGAGAACTTGGTATATCTGATATAGTTCTGGAGTCACTGGCTCAGTGTTTTTCTAGAAACAGTAGTGAAATTAAGGCAAGATATGAAACTCTTACTAATGAAGGCAATGCTGGAGGGGGTTCCAAGAATGGAAATGCTGAAGAGAATTCCCAAATTGACAGTTCTTTTGTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTTTTTTGCCGACGATGTCTAGTTTTTGATTGCAGATTACATGGATGTTCGCAGGACCTTGTCTTCCCAGCTGAGAAACAACCTTCATGGAACCCTCCTGATACTGAAAATGCACCATGTGGTCCAAATTGCTTCCGATCGGTACTCAAGTCAGAAAGATTCGCCAAAGTTACCTCTTCTACTCAGGCTGATGTTGAAGACAAAAGCTCTGGTGGTGGTTTATCTAGAAAGAAGTCTTCTGCTAGAAGGCGTACAAAATGCAGCCAAAGTGAGAGTGCTTCATCTAATGCAAAAAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGTTTCAGCTTCTCCCTCAGCATCATCTAAAACTAAATCCGTTGGGAAAAGTGGAATTGGTAAGAGGAACAGTAAGCGAGTGGCGGAACGTGTTCTAGTTGGCATGCAGAAGAGGCAGAAAAAGCCAGTGGCTTCTGATTCTGATTCCATCAGTGAAGCAGTTGGAGGTTCATTAAATGATATGGTTACTGTCCCACATGCTATGAGGGGTGAAGACAGCTTGAGGAAAGAAGAGACTGTGGATGAGAACACATTTAAACAAGATTTAACAGATAATGGATCTTGGAAAGCTCTCGAGAAAGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGCTGCTTACTAGCCAGGAATCTCCTAAGTGGTCTAAAGACGTGTTGGGATGTTTTCCAATACATAAATTGTGAAGAAGGAAAGATGTCTGGTCCTAGTGGGGATGCTACAAATTCTCTTGTGGAAGGCTACTCCAAGGGCAATAATGAAGTAAGACGAAGGTCAAGATTTTTACGTAGAAGAGGGAGAGTCCGTCGTTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATCAGGAAAAGGATTACAGAAAGAAAGGACCAGCCCTGCCGGCAGTACAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCTAAATGGAACCTGCTGCGAGAAGTACTGTGGATGCCCCAAGAGTTGCAAGAATAGGTTTCGTGGCTGTCATTGTGCAAAGAGTCAGTGCCGAAGTCGTCAATGCCCATGCTTTGCTGCAGATAGGGAATGCGATCCTGATGTTTGTAGGAATTGTTGGGTCGGTTGTGGCGATGGTACTCTTGGGAATCCTAGTCAAAGAGGGGATAATTATGAATGTAGGAACATGAAGCTTCTTCTCAAGCAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATATATCTGGCTGGGGAGCCTTTTTAAAGAATGGTGTTGGTAAGCATGAATACCTCGGAGAGTATACTGGAGAATTAATTTCTCATAGGGAAGCCGATAAGCGAGGAAAGATATATGACCGTGAAAACTCATCTTTTCTCTTTAATCTGAATGACCAGTTTGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCGAACCATGCTCCTGATCCAAATTGCTATGCCAAAGTTATTATGGTTGCTGGAGATCATAGAGTAGGCATTTTCGCCAAGGAACGGATTGGTGCTGGGGAAGAACTGTTTTATGATTATCGTTATGAGCCCGATAGAGCTCCTGCATGGGCTCGGAAGCCAGAGGCATCTGGATCCAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2610 0.4398 MSMASKPPPPPAPSPPPSSSKSAPPVDPSTKKVDDARPAVNDVLLVIDSLKKQVAAERVVSVKKKMEENRLKLVGVTDHLYKMSMERRTGGIADMNGSLDLLSKRQKGATDMHNGVNASNGDRESNGYHEDGHGSTAVLLGYNVTTKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIDDEEDKREFVESEDFILRMTIRELGISDIVLESLAQCFSRNSSEIKARYETLTNEGNAGGGSKNGNAEENSQIDSSFVEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPSWNPPDTENAPCGPNCFRSVLKSERFAKVTSSTQADVEDKSSGGGLSRKKSSARRRTKCSQSESASSNAKNISESSDSENGPGRDAVSASPSASSKTKSVGKSGIGKRNSKRVAERVLVGMQKRQKKPVASDSDSISEAVGGSLNDMVTVPHAMRGEDSLRKEETVDENTFKQDLTDNGSWKALEKGLLEKGMEIFGRNSCLLARNLLSGLKTCWDVFQYINCEEGKMSGPSGDATNSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGNPSQRGDNYECRNMKLLLKQQQRVLLGRSDISGWGAFLKNGVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHAPDPNCYAKVIMVAGDHRVGIFAKERIGAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0322 869 MobiDBLite consensus disorder prediction 1 35 - -
Lja2g0322 869 ProSiteProfiles SET domain profile. 720 835 IPR001214 GO:0005515
Lja2g0322 869 Gene3D SET domain 620 837 IPR046341 -
Lja2g0322 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 484 867 IPR045318 GO:0006338|GO:0018024
Lja2g0322 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 468 IPR045318 GO:0006338|GO:0018024
Lja2g0322 869 Pfam CXC domain 658 689 IPR041355 -
Lja2g0322 869 MobiDBLite consensus disorder prediction 355 470 - -
Lja2g0322 869 Pfam SET domain 732 834 IPR001214 GO:0005515
Lja2g0322 869 SMART CXC_2 654 691 IPR033467 -
Lja2g0322 869 MobiDBLite consensus disorder prediction 843 869 - -
Lja2g0322 869 MobiDBLite consensus disorder prediction 1 23 - -
Lja2g0322 869 MobiDBLite consensus disorder prediction 843 862 - -
Lja2g0322 869 MobiDBLite consensus disorder prediction 435 458 - -
Lja2g0322 869 MobiDBLite consensus disorder prediction 385 431 - -
Lja2g0322 869 ProSiteProfiles CXC domain profile. 606 705 IPR026489 -
Lja2g0322 869 SUPERFAMILY SET domain 594 840 IPR046341 -
Lja2g0322 869 CDD SET_EZH 720 836 - -
Lja2g0322 869 SMART set_7 720 841 IPR001214 GO:0005515
Lja2g0322 869 Coils Coil 201 221 - -
Lja2g0322 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 27 468 - -
Lja2g0322 869 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 869 IPR025778 GO:0031519
Lja2g0322 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 484 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0322 Lja-Chr2 2900293 2908394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0322 709 838 C2H2 Transcription Factor Family AT2G23740 26.531 1.67e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lja2g0322 SET 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0322 - K11430 gmx:100809840 1454.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0322 2 2900293 2908394 Lja2g0322 2 2900293 2908394 ECH