Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0284 ATGTTGGAGCTGTGCCGCTGGCCACTGGACATGTGCTTCGGCGGTGGTGGTGGCAACGATGGCAGCCTTCAGTGGCACATGGACTCGAAGCCCCATCACTATTCAATTGCAGTGGCACAAGCTAATTCGTCGTTGGAAGACCAAGGACAGGTTTACATCTCTCCCTCTGAAACTTTTGTTGGCGTGTACGACGGACATGGTGGACCTGAAGCTTCCCGTTTCATCAGAAACAATCTCTTCTCCTTCCTTCACAAGTTTGCTTCAGAGGAAGGTGGTTTGTCAGAGCAAGTGATAAAGAAGGCATTCAGTGCTACTGAAGAAGAGTTCCTGCACTTGGTGAAGCAGTCTTGGACTAAACGGCCACAAATTGCTTCTGTGGGTTCGTGCTGTCTTCTGGGGGCGATTTCAAAGGGTGTTCTTTATGTTGCTAATCTCGGCGATTCGAGGGCGGTTTTGGGGCGGAAAGCATTTGGAGAGCAGGGGAATTGGGCTCCTGTGGTGGCGGAGCGTTTGTCCACTGATCACAATGTTGCAGTGGAGGAAGTCAGAAAGGAGGTGGAGGCACTTCACCCTGATGATGCGCACATTGTGGTTCGCACTCGTGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGGGATGTTTATCTAAAGAAACCGGATTATGACAACAATCCTCTGTTCAGACAATTTGTATATCCGGTATCTCTGAACAGACCTGTAATGACAGCTGAACCATCCATATTGAAGCGGAAGCTGAAAGTTGAAGACTTGTTTTTAATCTTTGCATCAGATGGACTTTGGGACCATTTAACTGATGAAGCAGCAGTTGAAATCATCTCCAGAAGTCCAAGAACAGGAATAGCAAAACGATTGGTGAGAGCTGCACTGGAAGAGGCTGCAAAGAAAAATGGAAAGAGATATGAGGATTTAAAGAGAATTGAGAAAGGTGTTAGGCGCCTTTTTCATGATGATATTACAGTGATTGTTCTATACCTTGATAATTCACTAGGATCTTTAAATAGTTCAAGACATCAAGGGGTCTATCGTTGCATTGATACTCCTGTTGATATCTTTTCTCTCAGAGCAGATGAAGCAAACCGATAA 1119 0.4576 MLELCRWPLDMCFGGGGGNDGSLQWHMDSKPHHYSIAVAQANSSLEDQGQVYISPSETFVGVYDGHGGPEASRFIRNNLFSFLHKFASEEGGLSEQVIKKAFSATEEEFLHLVKQSWTKRPQIASVGSCCLLGAISKGVLYVANLGDSRAVLGRKAFGEQGNWAPVVAERLSTDHNVAVEEVRKEVEALHPDDAHIVVRTRGVWRIKGIIQVSRSIGDVYLKKPDYDNNPLFRQFVYPVSLNRPVMTAEPSILKRKLKVEDLFLIFASDGLWDHLTDEAAVEIISRSPRTGIAKRLVRAALEEAAKKNGKRYEDLKRIEKGVRRLFHDDITVIVLYLDNSLGSLNSSRHQGVYRCIDTPVDIFSLRADEANR* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0284 372 CDD PP2Cc 32 337 IPR001932 -
Lja2g0284 372 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 371 - -
Lja2g0284 372 ProSitePatterns PPM-type phosphatase domain signature. 59 67 IPR000222 GO:0043169
Lja2g0284 372 SUPERFAMILY PP2C-like 33 339 IPR036457 -
Lja2g0284 372 PANTHER ALPHABET, ISOFORM E-RELATED 3 371 - -
Lja2g0284 372 ProSiteProfiles PPM-type phosphatase domain profile. 33 337 IPR001932 -
Lja2g0284 372 Pfam Protein phosphatase 2C 55 308 IPR001932 -
Lja2g0284 372 Gene3D - 22 345 IPR036457 -
Lja2g0284 372 SMART PP2C_4 30 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0284 Lja-Chr2 2602609 2605093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0284 1 340 PP2C-type Phosphatase Gene Family AT3G51370 50.843 2.42e-126 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0284 - K01102 gmx:100802394 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0284 2 2602609 2605093 Lja2g0284 2 2602609 2605093 ECH
Lja2g0284 2 2602609 2605093 Lja5g0425 5 3747363 3750549 PCT