Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0281 ATGGAAACATTTAAGAAATCTCTCGCTATGATCTCTCTATCTTTTCTGTTTCTGGTTCTTTGTGATATGTCTTTGGCGAGAACCGTGAAGACCACATCAAATCATAACCAGAAGAGTACTTACATAGTACATGCTGTCAAATCCCAAATGCCAGAAAGCTTTGATCACCACTCGGCTTGGTTCGAATCGACTTTAAAGTCAGTTTCTGACTCAGCAGAAATGATCTACACCTATGACAAAGCTATTCATGGATTCTCAACAAGGTTAACACCAGAGGAAGCCCGTTTGCTGCAAAGTAGAAACGAGATTTTAAAGGTGCTGCCAGATGAAATCTATAAGCTCCATACAACTCGAACACCATTCTTCCTCGGGCTCAATAAAATCGCTGCAAGCACATTCACCAAATCCAACACAGGACGTAGTGAAGTCATCATCGGAGTCATAGACACAGGTGTTTGGCCTGAGAGCAAGAGCTTCGACGACACCGGGTACGGACCCATCCCCAGCACCTGGAAAGGAAAATGCGAGGTTGGTGCAAATTTCACAACTGCCAACTGCAACAAGAAACTAATCGGTGCTAGGTTCTATAATAGTCGCACCAGGTTCTATAATAGTGGCTTGGTGGGCCCAAATGATAATTCTATAGTTTCTCTCTCTCCGCGTGACGATGAAGGTCACGGTACCCACACTGCCAGCACTATTGCAGGCTCTCTAGTGCAAAATGCGAGCCTCTTCGGTTACGCAGCAGGAACGGCGCGTGGGATGGCCCCACACGCTAGAATTTCCGTCTACAAGGTCTGCTGGATGGATGGTTGTGCTATTTCTGACGTATTGGCTGCGATAGACCAAGCCATCGTTGACAATGTGAATGTTCTTTCCTTGTCGCTCGGAGGTGAAACGTCTGATTACTACAAAGATAACCTTGCGATTGGAGCGTTTTCGGCAATGGAGCATGGGATTGTTGTGTCTTGCTCTGCTGGGAACTATGGTCCTCTACCCTCTTCTGTCACTAATGTGGCACCTTGGATTATCACCGTGGGAGCTGGCACAATTGATCGAGATTTCCCTGCATACGTTAGCCTAGGAAATGGAAAAAACTATTCTGGTGTGTCCCTTTACAGTGGAAACAAATTGCCTGATAAACCTGTTTTGTCACTCATCTACGGGAAGAGTGCGGGCATAGGTGAGAATTGTCAGCCAGGAAGCTTGCCGGCGCAAAAAGTCAAGGGAAAGATCGTGGTGTGTGATCGCGGAGCCGACGATAGGGTGTGGAAAGCAGAGGCGGTGAAATCCGCTGGCGGTTTGGGCATGGTGTTGGTCAACGACGCGGCTGAGGCGGGGGATCTGAGGGCGGATCCATTTGTTTTGCCAGGACTTATGGTGGACGCAAAAGCAGGCGAAGCCATCAAGCAATACTTAATTTCTGATCCAAAACCGACATCAACGATTGTGTTTGAGGGGACAAAGGTCGAGATCGAGCCTTCTCCTGTTGTTGCAAAGTTCAGCTCCAGGGGCCCAAATTATATCACCAAAAAACTATTGAAGCCTGATTTGATCGCGCCAGGTGTCAACATCTTAGCTGCATTTACCAGGAACGCGGGTCCGAGTCCTCTGGATTCAGATGAAAGGCGCGTGGATTTCAACATCCTCTCGGGGACGTCCATGTCATGCCCTCACGTGAGTGGTATTGCAGCTTTGATTAAGTCAGCTCATCCAGACTGGAGTCCGGCTGCGATTCGGTCTGCGTTGATGACAACAGCTTATTCGACTTACAAGAATGGTAAGCCATTGCTGGACATTGCAACTGGAAAACCAGGAACGCCGTTTGATTTTGGCGCAGGACATGTAGACCCTGTCCCTGCACTTAATCCAGGGCTTATTTATGATTTGACGGTAGATGATTATCTGAATTTTCTCTGTTCGATAGACTACACACCTGAAATGATTGAACTCATCGCGAAAAGAAAATACGTGTGTGACGGAAAGACACACTACTTTAATTACCCTTCATTTGCAGTGATTTTTTATGCTGGTGAGAATAGTACGCAGGTTAAGCAAATGCGAACTCTCACCAATGTGGGTGCTGCGGGAACATACAAGGTATCTGTTCAGACAGATATCCCAGGCGTCAAGATCACAGTTGAACCGGAAGTGTTGAGTTTCACAGTAAATGAGAAAAAATCATATAGTGTTACATTCACTGCATCAGGTGTGAAGCAGCAGAAAACTCCAGGTTTTGGACGTTTGGAATGGTCTAATGGAAAAAACATTGTTCGAAGTCCTATCTTATTTAGTTGGGAACCGTGA 2307 0.4655 METFKKSLAMISLSFLFLVLCDMSLARTVKTTSNHNQKSTYIVHAVKSQMPESFDHHSAWFESTLKSVSDSAEMIYTYDKAIHGFSTRLTPEEARLLQSRNEILKVLPDEIYKLHTTRTPFFLGLNKIAASTFTKSNTGRSEVIIGVIDTGVWPESKSFDDTGYGPIPSTWKGKCEVGANFTTANCNKKLIGARFYNSRTRFYNSGLVGPNDNSIVSLSPRDDEGHGTHTASTIAGSLVQNASLFGYAAGTARGMAPHARISVYKVCWMDGCAISDVLAAIDQAIVDNVNVLSLSLGGETSDYYKDNLAIGAFSAMEHGIVVSCSAGNYGPLPSSVTNVAPWIITVGAGTIDRDFPAYVSLGNGKNYSGVSLYSGNKLPDKPVLSLIYGKSAGIGENCQPGSLPAQKVKGKIVVCDRGADDRVWKAEAVKSAGGLGMVLVNDAAEAGDLRADPFVLPGLMVDAKAGEAIKQYLISDPKPTSTIVFEGTKVEIEPSPVVAKFSSRGPNYITKKLLKPDLIAPGVNILAAFTRNAGPSPLDSDERRVDFNILSGTSMSCPHVSGIAALIKSAHPDWSPAAIRSALMTTAYSTYKNGKPLLDIATGKPGTPFDFGAGHVDPVPALNPGLIYDLTVDDYLNFLCSIDYTPEMIELIAKRKYVCDGKTHYFNYPSFAVIFYAGENSTQVKQMRTLTNVGAAGTYKVSVQTDIPGVKITVEPEVLSFTVNEKKSYSVTFTASGVKQQKTPGFGRLEWSNGKNIVRSPILFSWEP* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0281 768 CDD Peptidases_S8_3 112 588 IPR034197 -
Lja2g0281 768 Pfam PA domain 393 469 IPR003137 -
Lja2g0281 768 Gene3D - 352 491 - -
Lja2g0281 768 Pfam Subtilase family 141 614 IPR000209 GO:0006508|GO:0008236
Lja2g0281 768 Gene3D Peptidase S8/S53 domain 143 635 IPR036852 GO:0004252|GO:0006508
Lja2g0281 768 Gene3D - 639 766 - -
Lja2g0281 768 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Lja2g0281 768 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Lja2g0281 768 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Lja2g0281 768 CDD PA_subtilisin_like 358 483 - -
Lja2g0281 768 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 29 766 - -
Lja2g0281 768 Pfam Peptidase inhibitor I9 40 115 IPR010259 -
Lja2g0281 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
Lja2g0281 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 766 IPR045051 -
Lja2g0281 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Lja2g0281 768 SUPERFAMILY Subtilisin-like 114 626 IPR036852 GO:0004252|GO:0006508
Lja2g0281 768 Pfam Fibronectin type-III domain 666 763 IPR041469 -
Lja2g0281 768 ProSiteProfiles Serine proteases, subtilase domain profile. 122 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0281 Lja-Chr2 2575648 2578122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0281 7 766 Subtilisin-like Serine Gene Family AT5G67360 60.156 0.0 923
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0281 - - gmx:100815413 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0281 2 2575648 2578122 Lja2g0281 2 2575648 2578122 ECH
Lja2g0281 2 2575648 2578122 Lja4g3415 4 64560327 64563265 PCT