Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0280 ATGTTTACGAAATCTTCGGCTGTGACCACTTTCTCAATTTTGTTTGTTCTTCTCTGCGATGCATCTCTGGCCACAAATGCGAAGACTACGCAAAACCAAAAGAGTAGTTACATAGTCCATGTTGCCAAATCCCAAATGCCAGAAAGCTTCAACCACCCTTTAGCGTGGTTCGAATCAACTCTGAAGTCAGTATCTGATTCAGCTGAATTAATCTACACCTATGACAAAGCGATCCATGGATTCTCAACAAGGTTAACACCCGAGGAAGCTCATTTGCTGCAGAGTCGAAACGGGATTCTAAAGGTGCTGCCAGATAAAATCTACAAGCTCCAGACAACTCGAACCCCACAATTTCTTGGGCTCGATAAAATTCCTGCAAGCACATTCACTCAATCCAATAGAGGAGGTAGCAACGTTGTCATCGGAGTCATCGACACTGGTGTTTGGCCTGAGAGCAAGAGCTTCAACGACACCGGATATGGACCCATTCCTAGCACCTGGAAAGGGAAATGCGAGGTAGGTGCAAATTTCACAACCGCCAACTGCAACAAAAAATTGATTGGAGCTAGGTCCTATAAAGATGGCCTTGAGGCCTTGGTGGGCCCACTCGATGACTCCATAGTTTCTCACTCACCGCGTGACGATGTTGGTCACGGCACCCACACTGCAAGCACAGCTGCTGGCTCTGCGGTGAAAAACGCGAGTCTCTTCAATTACGCCTCCGGAACGGCACGTGGAATGGCTCCACACGCTAGAGTCGCCGTCTACAAGGTTTGTTGGACTATAAATTGTGCCGCTTCTGACATACTGGGTGCCATCGACCAAGCCATCGCCGACAACGTGAATGTTCTTTCCATATCGCTCACTGGTTTAGTGCTGGATTATGACGACGACCACATCTCCATCGGCGCGTTTTCAGCAATGGAGCATGGGATTGTTGTGTCTTGCGCCGGCGGAAATTATGGTCCCTTACCCGCTTCTCTCTACAATCAGGCACCTTGGATTATCACTGTGGGAGCTGGCACAATCGATCGGGACTTCCCAGCGTACGTTAGTCTTGGAAACGGACAAAAGTATCGCGGGGTGTCCCTTTATAGTGGCAAAAAATTACCTGATAAACTTGTACCGTTCATATACGCAGGGAATGCGAGCAGAGGTGGAGTAACACCAAACCAATCTGAGTTTTCTGGGTTTTGTGTGGAAGGAAGCTTATCGCCGCAAAAGGTCAAGGGAAAGATTGTCTTGTGTGATAGCGGAAACGGTCGTGGGGAGGAGAAAGCAGAGGCAGTGAAATCCGCCGGCGGTTTGGGCATGGTGTTGGCCAACCGCGTGATTGAAGGGGAGGATACGACGGGGAGGGCATATGATTTTCCAGCAAATTTGGTCGGTGCAAAAGCTGGTGAAGCTATCAAGCGGTACTTGTTTTCTAATCCAAAACCGATAGCAACAATTTTGTTTGGGGGAACAAAAGTTGCAATCGAGCCATCGCCTGTCGTTGCGGTATTTAGCTCTAGGGGCCCAAATACTATCAGTCCGGATTTATTGAAGCCTGATTTAATTGCACCAGGTGTCAACATCTTAGCAACATATACCAGGAACGCAGGTCCCACTGATCTGGATTCAGATAAAAGGCGTGTTGATTTTAATATCATCTCAGGCACGTCCATGTCATGCCCTCACGTGAGTGGTATCGCAGCTCTGATCAAGTCGGTTCATCCAAGCTGGAGCCCAGCTGCCATTCGATCTGCAATGATGACAACATCGTATTCGACTTACAAGAACGGTAAGTTATTGTTGGACGGTGCAACTGGAAAACCAGCGACGCCGTTTGATTTTGGCGCAGGACATGTGAACCCCGTCCCTGCACTTAATCCTGGGCTTATTTATGATTTGACGGTAGATGATTATTTGAACTATCTTTGTTCATTAAATTACACATCAAAAAGGATTGAAGTCCTGGCAAAGAGAAAATTCAAGTGCAATGGAAAGAAACACTACTTTAATTACCCTTCATTTGCTGTGATTTTTGAAGCTCGTAAAGATGTTGTACAAGTTAAGCAAATGCGAACTCTTACAAATGTGGGTGCCACGGGAACATACAAGGTATTAGTTAAGATAGATATCCTAGGCGTCAAGGTCAGGGTTCAGCCAGAAGTGTTAAGTTTTGGAGTAAATGAGAAAAAATCCTATGCGATTACATTCACAGCGTTAGATGTCAAGCCGCGGAAAACTCATGGTTTTGGACGTTTAGAATGGTCTAATGGAAAGAACATTGTTGGAAGTCCTATCGCTTTTAGTTGGGTGTGA 2307 0.4642 MFTKSSAVTTFSILFVLLCDASLATNAKTTQNQKSSYIVHVAKSQMPESFNHPLAWFESTLKSVSDSAELIYTYDKAIHGFSTRLTPEEAHLLQSRNGILKVLPDKIYKLQTTRTPQFLGLDKIPASTFTQSNRGGSNVVIGVIDTGVWPESKSFNDTGYGPIPSTWKGKCEVGANFTTANCNKKLIGARSYKDGLEALVGPLDDSIVSHSPRDDVGHGTHTASTAAGSAVKNASLFNYASGTARGMAPHARVAVYKVCWTINCAASDILGAIDQAIADNVNVLSISLTGLVLDYDDDHISIGAFSAMEHGIVVSCAGGNYGPLPASLYNQAPWIITVGAGTIDRDFPAYVSLGNGQKYRGVSLYSGKKLPDKLVPFIYAGNASRGGVTPNQSEFSGFCVEGSLSPQKVKGKIVLCDSGNGRGEEKAEAVKSAGGLGMVLANRVIEGEDTTGRAYDFPANLVGAKAGEAIKRYLFSNPKPIATILFGGTKVAIEPSPVVAVFSSRGPNTISPDLLKPDLIAPGVNILATYTRNAGPTDLDSDKRRVDFNIISGTSMSCPHVSGIAALIKSVHPSWSPAAIRSAMMTTSYSTYKNGKLLLDGATGKPATPFDFGAGHVNPVPALNPGLIYDLTVDDYLNYLCSLNYTSKRIEVLAKRKFKCNGKKHYFNYPSFAVIFEARKDVVQVKQMRTLTNVGATGTYKVLVKIDILGVKVRVQPEVLSFGVNEKKSYAITFTALDVKPRKTHGFGRLEWSNGKNIVGSPIAFSWV* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0280 768 CDD Peptidases_S8_3 108 589 IPR034197 -
Lja2g0280 768 Gene3D - 640 767 - -
Lja2g0280 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Lja2g0280 768 CDD PA_subtilisin_like 350 484 - -
Lja2g0280 768 Pfam Subtilase family 136 615 IPR000209 GO:0006508|GO:0008236
Lja2g0280 768 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 25 766 - -
Lja2g0280 768 SUPERFAMILY Subtilisin-like 110 627 IPR036852 GO:0004252|GO:0006508
Lja2g0280 768 Pfam PA domain 391 470 IPR003137 -
Lja2g0280 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 766 IPR045051 -
Lja2g0280 768 Gene3D Peptidase S8/S53 domain 138 636 IPR036852 GO:0004252|GO:0006508
Lja2g0280 768 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Lja2g0280 768 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Lja2g0280 768 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Lja2g0280 768 ProSiteProfiles Serine proteases, subtilase domain profile. 118 623 - -
Lja2g0280 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Lja2g0280 768 Gene3D - 344 492 - -
Lja2g0280 768 Pfam Fibronectin type-III domain 667 764 IPR041469 -
Lja2g0280 768 Pfam Peptidase inhibitor I9 36 110 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0280 Lja-Chr2 2570613 2572919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0280 5 767 Subtilisin-like Serine Gene Family AT5G67360 59.115 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0280 - - gmx:100801866 967.992