Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0279 ATGAATCATCGGAGGTCATTATCTTTGATATCAATCATACCAAACAACGCCATTTCAACGCGCTATCTCGTCGTATTTCCGCGCCGGAGTTACGGCGGAGGACATGGCTTCAGCACCGCCTCTGAATCAGCTTGGACCGAATTTCCCATGGAGAACGCGTATGAGCTCTTAGGAGTGTCGGAAACCAGCTCATTTGCTGAGATCAAAGCGTCGTTTCGCAAATTGGCCAAAGAAACTCACCCGGACCTCGCTGAGTCAAGGAACGATTCCGCTGAGTCTCGACGATTTGTGCAAATCCTCGCCGCCTATGAGATTCTTTCAGATTCTCAGAAGAGAGCCAACTATGACATGTATCTGATGTCTCAAAAAAAGCTTGTGCAAAGACATTCTAGGCAGGGTTCAAAATTACACATTTATGAATCACAGGCTACTGTGTTCCGGGAGATGGAAGTTGTTGATTGGTTAAAGTGGTACAGATCAGCTATAAAAGATATTTTGTCAGAGCAGAAGGTTGTGCTTGGAACAGGATATTTGGATGTACTTGAGAGAGATTTTTATTCAGCTATTCATGCAGCATACTATGGTCCTGAAATTGATTCTATGCCCATGGAGCTTCTTCCTGACTGTTTTGAGGCTGAGGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTAGTTTCAGGCCGTGATCTTTTTGGGATGGTTTGCCTAGTCAACAAGTTTCCAGAGATAACATCAATCAATAATGAAAAGTTAACTTCTTTTAGATCCTTCCATTCAAGCCTGTGTCAGTCTATAACGAATGTAAACATCCAGAGGAATGATGAAAGGCCAGATGATTTTGGAACTCATCAAGGTCACAGTTCTAAAGTTTCAAGTTATGTATCAGATGCATATAGAGATCTAGAATTGCATGTCTCTGGAAGAGTGGTTGCTACAGCATCCAGGGCCCTACCTGGCTGCAATTCTGGTGCGATGAAAAATGAAGAAGCTGAAGATCACATTCACGTGTTTCTTAATTCAGATGAAGATCCCAGACATACCAGTGGAGGCTTTTCGAAAAATTTCTTTGCAAATGATGCTGCTGGAAGCAGGATTCATTTGGGAAGTATATCTGGACTTGGGAGCAGTCCAGATGAAGGATGTTGTTATGCATACAATACCAGTGGTGAAAAGACCCATATGATTATGAAACATCGAACATTGATGGTGAAGCATCTGCACTGGTATCACGTGGGTGAGGAAGTTTCAATTTGTGAGTGTAGATGCACTAGAGCACGTTTACCTCCAAGCAAATATTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATAGGGGGTTGGTATGTCGAAACATATGGCAAAGATAAGAATGGTCGTACAAGGCCATCACAAAGGTTCTGGGATGGCTTGGATTATAGTGAGCAAGCTGACAGGAGACTTCATCCAGCTATGTATCTGTTTGCCCTTGCATATCGAACACTTGATCTTGAATATGCCAAAGCAAGCAAGAAAACATTTAGGAATGTTGTTGGGGCACATATGTTCAGAGTTCTTCACTGGTGCAGGAAACTGGCTAAATAG 1587 0.4297 MNHRRSLSLISIIPNNAISTRYLVVFPRRSYGGGHGFSTASESAWTEFPMENAYELLGVSETSSFAEIKASFRKLAKETHPDLAESRNDSAESRRFVQILAAYEILSDSQKRANYDMYLMSQKKLVQRHSRQGSKLHIYESQATVFREMEVVDWLKWYRSAIKDILSEQKVVLGTGYLDVLERDFYSAIHAAYYGPEIDSMPMELLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLVNKFPEITSINNEKLTSFRSFHSSLCQSITNVNIQRNDERPDDFGTHQGHSSKVSSYVSDAYRDLELHVSGRVVATASRALPGCNSGAMKNEEAEDHIHVFLNSDEDPRHTSGGFSKNFFANDAAGSRIHLGSISGLGSSPDEGCCYAYNTSGEKTHMIMKHRTLMVKHLHWYHVGEEVSICECRCTRARLPPSKYWLFEPRCGFHDIGGWYVETYGKDKNGRTRPSQRFWDGLDYSEQADRRLHPAMYLFALAYRTLDLEYAKASKKTFRNVVGAHMFRVLHWCRKLAK* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0279 528 Gene3D DnaJ domain 41 139 IPR036869 -
Lja2g0279 528 Coils Coil 526 528 - -
Lja2g0279 528 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 34 526 - -
Lja2g0279 528 SUPERFAMILY Chaperone J-domain 48 122 IPR036869 -
Lja2g0279 528 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Lja2g0279 528 SMART dnaj_3 51 111 IPR001623 -
Lja2g0279 528 PRINTS DnaJ domain signature 54 72 IPR001623 -
Lja2g0279 528 PRINTS DnaJ domain signature 91 111 IPR001623 -
Lja2g0279 528 PRINTS DnaJ domain signature 72 87 IPR001623 -
Lja2g0279 528 CDD DnaJ 52 108 IPR001623 -
Lja2g0279 528 Pfam DnaJ domain 52 116 IPR001623 -
Lja2g0279 528 ProSiteProfiles dnaJ domain profile. 52 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0279 Lja-Chr2 2565457 2569329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0279 54 116 C2H2 Transcription Factor Family AT1G74250 42.424 8.01e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0279 - - gmx:100805332 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0279 2 2565457 2569329 Lja2g0279 2 2565457 2569329 ECH