Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0264 ATGGGTGAGGAGTACTCACCTACGGTGGTTGTGAGAGCCTACGATCCAAATAAAGACAGAGAAAGAGTGGAAGCCGTGGAAAGAACATGCGAGGTTGGACCCAGTGACAAGCTCTCTCTCCTAACCGACATGCTCGGTGACCCAATTTGCAGGGTCCGCCACTCACCTGCTTTTCTCATGCTGGTGGCCGAAATCGGTAAAGAGATAGTAGGGATGATAAGAGGTTGCATAAAAACAGTCACATGCGGGAAGAAGCTCTCCAGAAACAGAAAGCAAACAGACACCGCGAATCACGTTCCAGTTTACACCAAAGTAGCCTACATATTAGGCCTTCGCGTTTCTCCTAATCAACGGAGAATGGGAATAGGGTTGAAACTGGTACAGAAAATGGAGGCGTGGTTCAGGGAAAACGGAGTTGAATACTCATACATGGCAACGGAAAACGACAATTTAGCGTCCGTTAAACTCTTCACCGACAAATGCGGATATTCAAAGTTCCGTACACCTTCCATCCTTGTCAATCCCGTTTTCGCTCACCGGGCCAAAGTGTCTTCAAATGTCACCATCATCCACCTGAAACCCTCCGACGCAAAAACCCTCTACCGCCGCCGCTTCGCCACGACGGAGTTTTTCCCCCGCGACATTGACTCTATTCTCAATAACAAACTCTCCCTCGGCACTTTCCTCGCCGTCCCGCGTGGGTCCTACACCCCCGACACGTGGCCCGGTGCGGAACGGTTTCTGTCGGACCCACCAGAGTCCTGGGCCGTTATCAGCGTTTGGAATTCCAAGGAGGTGTTCACGCTCCAGGTTCGCGGCGCGTCACGCGTGAAGAAAACTCTGGCCCAGACGACGCGGGTTGTCGACCGGGCACTGCCGTGGCTCCGGCTACCGTCGGTGCCGGATTTGTTCCGGCCGTTCGGGTTCCATTTTTTGTATGGACTTGGAGGTGAAGGTCCGGAGGCGGTGAAGATGGTGAAGGCACTGTGTGGATTCGCGCATAACTTGGCAATGGAGAGTGGGTGTGGGGTGGTGGCCACGGAGGTTGCCCCCTGTGAACCCTTGAGATTTGGGATCCCACATTGGAAGATGCTGTCTTGTGAGGAGGATTTGTGGTGTATCAAGCGGCTAGCGGAGGATTACAGCGACGGCGCCGTCGGTGATTGGACCAAATCACCACCTGGAATCTCTATTTTTGTTGACCCTAGAGAGATCTAA 1218 0.532 MGEEYSPTVVVRAYDPNKDRERVEAVERTCEVGPSDKLSLLTDMLGDPICRVRHSPAFLMLVAEIGKEIVGMIRGCIKTVTCGKKLSRNRKQTDTANHVPVYTKVAYILGLRVSPNQRRMGIGLKLVQKMEAWFRENGVEYSYMATENDNLASVKLFTDKCGYSKFRTPSILVNPVFAHRAKVSSNVTIIHLKPSDAKTLYRRRFATTEFFPRDIDSILNNKLSLGTFLAVPRGSYTPDTWPGAERFLSDPPESWAVISVWNSKEVFTLQVRGASRVKKTLAQTTRVVDRALPWLRLPSVPDLFRPFGFHFLYGLGGEGPEAVKMVKALCGFAHNLAMESGCGVVATEVAPCEPLRFGIPHWKMLSCEEDLWCIKRLAEDYSDGAVGDWTKSPPGISIFVDPREI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0264 405 Gene3D - 34 169 - -
Lja2g0264 405 PANTHER N-ACETYLTRANSFERASE 9 404 - -
Lja2g0264 405 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 9 404 - -
Lja2g0264 405 CDD NAT_SF 60 141 - -
Lja2g0264 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 165 IPR016181 -
Lja2g0264 405 Pfam Acetyltransferase (GNAT) family 54 163 IPR000182 GO:0016407
Lja2g0264 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 182 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0264 Lja-Chr2 2446610 2448424 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja2g0264 Acetyltransf_1 4.2e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0264 - - gmx:100800613 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0264 2 2446610 2448424 Lja2g0264 2 2446610 2448424 ECH
Lja2g0264 2 2446610 2448424 Lja4g3432 4 64930418 64932394 PCT