Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0241 ATGCTCTCACTCTCAGTCTCATCTAACATAGGAAAAATGGCTGCTAGTACTTCGAAGCCACCGTTATGTTTCCAAAGTCAAGAACAAACATGGGTTTCACGTGGCCCCACTTTTCACCAATTCTCCAATTTGGGTTCAACTTCAAGGGTGAGAACTACTACAAGTCTGAGGCTAGAAAGGAGGAAAAGGAAGGTGGAGTTTCTGGTGAGAGCGTGTGAGCAAGAGGAGCAAAGTAGGTACGGTGCGGCGACGACGGAGGAAGACGAATATTTCGTGAAGGTTCTGAGAGAATCCCAGCCTTATATTTCTGTCCACAGGGGCAGGGTGTTTGTTGTCCTCATTTCTGCTGAAATTGTTGCTAGTCCTTACATCCATGCCATACTTCAGGATATAGCTTTTCTTCATCACCTGGGAATCAGGTTTGTTCTTGTTCCAGGAACCCATGTGCAAATAGACAAGCTTTTAGCTGAGAGAGGGAGCCGGCCTAAATATGTTGGTAGATATAGAATAACTGATGAAGAGTCTCTAGAAGCTGCAATGGAAGCGGCTGGGGGAATAAGATTGATGATAGAAGCAAAGCTTTCTCCTGGACCTTCCATATGCAATATTCGACGACATGGTGACAATAGTCGTTGGCATGATGTTGGAGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGGATTGATTTTGGGTCGACTGGGGAAGTTAAAAAAGTAGACGCATCTCGCATGCGTGAGAGGCTTGATGCTGGTTGTGTAGTTGTTTTAACCAACTTGGGCTACTCCAGCTCTGGACAAGTATTAAATTGCAACACCTATGAAGTTGCGACAGCTTGTGCCCTGGCTATGGGAGCAGACAAACTAATATGCCTTATAGATGGCCCAATACTTGATGAGAGTGGACGCCTAATTCGTTTCTTGCCTCTTCCCGAAGCAGACATGTTAATTCGGAAACGGGCTGAGCAAAGCGAAACGGCTGCTAACTATGTGAAAGCTGTTGATGAAGATGATCTCAACTCTCTTGAGCATAACAATTTTAATGGGACAGTGAAGTCTCCACCTAATGGACAACGCTTTACAGAATGGCATAATACAACCTTCCATAATGGTGTTGGTTTTGAGAATGGGAATGGCTTAGGGACCAGTGAACAAGGTTTTGCTGTTGGAGGTCATGAGCGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTCGTTTGCAGAGGTGGGGTTCAAAGAGTTCACCTGTTGGATGGCACTATTAGCGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGCATGGGAACAATGGTTGCTAGTGATCTTTATGAAGGCACTCGGATGGCACAGATGAAAGATATTTCTGGAATAAAACAAATTATTCAGCCTTTGGAAGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGCTAAAAGCGATGGAGAATTTCGTTGTTGTGGAACGAGAAGGTCAAATAATTGCTTGCGCTTCCCTTATTCCTTTCTTTGAGGATAGGTGTGGTGAGATTGCTGCCATTGCAGTAGCTCCTGAATGCCGTGGCCAGGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCAGCATCTCTTGGATTGGATATGCTTTTCCTGCTGACAACACGGACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAAAATGATCAATCTGTCCCGCAAGTCAAAGTATTATATGAAGAAGCTTCTACCAGATAGAAGTGGAATTACTGTTGGTGGTGAACTTGCTTCAAATTAG 1860 0.4419 MLSLSVSSNIGKMAASTSKPPLCFQSQEQTWVSRGPTFHQFSNLGSTSRVRTTTSLRLERRKRKVEFLVRACEQEEQSRYGAATTEEDEYFVKVLRESQPYISVHRGRVFVVLISAEIVASPYIHAILQDIAFLHHLGIRFVLVPGTHVQIDKLLAERGSRPKYVGRYRITDEESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHDVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDASRMRERLDAGCVVVLTNLGYSSSGQVLNCNTYEVATACALAMGADKLICLIDGPILDESGRLIRFLPLPEADMLIRKRAEQSETAANYVKAVDEDDLNSLEHNNFNGTVKSPPNGQRFTEWHNTTFHNGVGFENGNGLGTSEQGFAVGGHERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQMKDISGIKQIIQPLEASGILVKRTDEELLKAMENFVVVEREGQIIACASLIPFFEDRCGEIAAIAVAPECRGQGQGDKLLDYMEKKAASLGLDMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKMINLSRKSKYYMKKLLPDRSGITVGGELASN* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0241 619 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 457 605 IPR000182 GO:0016407
Lja2g0241 619 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 412 603 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lja2g0241 619 SUPERFAMILY Carbamate kinase-like 405 453 IPR036393 -
Lja2g0241 619 Gene3D - 457 603 - -
Lja2g0241 619 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 460 606 IPR016181 -
Lja2g0241 619 CDD AAK_NAGS-ABP 91 451 IPR033719 -
Lja2g0241 619 Pfam Amino acid kinase family 123 317 IPR001048 -
Lja2g0241 619 Gene3D - 89 456 IPR036393 -
Lja2g0241 619 PANTHER AMINO-ACID ACETYLTRANSFERASE 83 613 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lja2g0241 619 PANTHER AMINO-ACID ACETYLTRANSFERASE NAGS2, CHLOROPLASTIC-RELATED 83 613 - -
Lja2g0241 619 Hamap Amino-acid acetyltransferase [argA]. 91 603 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lja2g0241 619 Pfam Acetyltransferase (GNAT) family 496 562 IPR000182 GO:0016407
Lja2g0241 619 SUPERFAMILY Carbamate kinase-like 91 325 IPR036393 -
Lja2g0241 619 CDD NAT_SF 498 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0241 Lja-Chr2 2222413 2230857 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja2g0241 AA_kinase 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0241 K14682 - gmx:100777694 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0241 2 2222413 2230857 Lja4g3447 4 65105350 65110759 PCT